| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_34840 |
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| Symbol | |
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| ID | 8388806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3786226 |
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| End bp | 3787632 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644977504 |
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| Product | hypothetical protein |
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| Protein accession | YP_003135273 |
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| Protein GI | 257057441 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.204167 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.103946 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGTGC CCGTGACCGC TTCCATTGAC CCGACTTCCA TCGACCCGAC CGACCTGCGC
GCGCCGGAAC TGCCACCCAC GACTCTCGCC GCCCGTGCCG CGGCGGTCCT GCGCGACAAC
GACACGGGCA CCCTCGTCAC CGCCTCCCCC AAGCTCTATC CGCACATGTG GAGCTGGGAC
GCGGCGTTCA TCGCCATCGG CCTTGCCCAC CTCGACGTGA ACAGGGCCCT CACCGAACTC
GACACCCTGC TGTCCGCGCA ATGGTCGGAC GGCATGATCC CCCACATCGT CTTCACCGAC
GCCACGAGCT ACTTCCCCGG CCCCGACCGG TGGGGCACCG ACTCCGTCCC ACAGCGGCCA
CCGCACGTGC GCACCTCCGG CATCTGCCAA CCTCCGGTAC ACGCGATCGC GTTGCGTCGC
ATCGTCGACA TCGCACGCCA CGTCTCACGA GACGACGTCG AACTCGCCGA GACGTTCGCG
GCCCGAACCT GGCCCGCGCT GTACCGATGG CATCGCTGGC TCGCGCGACA CCGCATGTCC
GAATCCTGTG GCCTGATCAC GATCGTGCAC GGCTGGGAGT CCGGAATGGA CAATTCGCCG
CGGTGGGACG CCCCCTACGC ACACGTGCAG CCGGGACCGG ATCTGCCGCC GTACGTGCGG
CTGGACCTCC TCGGCGTCGA CGATCCGAAC GAACGACCCA GTGACGCCGA GTACGACCGC
TATCTCTGGC TCATCGAACA GCTACGGCGC GCCGACTACG ATCCCGAAGT GGTACCGAAG
ACCTTGGACT TCCGTGTCGG CGACGTGTTC ACCACGGCAT TGTTCGCGAT CGCCTGCGAC
GACCTGGTCG AGCTCGCCCA CGAGCTCTCC CTCGACGCCC CCGACGAGGT CGCCGAGCTG
CGCACCTGGG CCGCGCACGC CCGGGAAGCA GTGGCCCACA GCGCCGACCC GGACACCGGG
CTCGCCTTCG ACAAGGACCT GCGCAACGGC GACACGACGA GAACCACCAC GGTCGCGGCG
TTCTCCCCCT TGCTGTGTTC GGCACTGCCG GAACACCTGG AACATCGACT GCTGACGCAC
CTGACCGGGC CGGCCTGGGC CGGGCATCCG AAGTTCCACG CCGCCGTGGC CCCTTCGGTG
TCCCCCACGG AACCGGGCTT CGACGCACGC CGCTACTGGC GTGGCCCGCA ATGGCCCGTC
CTGGTGTGGC TGTTCAGTTT CGCCTTCCAG CGCAGAGGCT GGACCGGACT CGCGCGGAAC
TGGCGCGAAC AGGGCCTCCG GCTGGTGGCC GACGGTTCCT TCGGCGAGTA CTACGAACCC
TTCACCGGAG AACCTCTCGG CAGCACCCAA CAATCCTGGA CCGCGGCCGT GACACTCGAC
TGGCTCTGCG GCCGTTGGTG GGCCTGA
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| Protein sequence | MGVPVTASID PTSIDPTDLR APELPPTTLA ARAAAVLRDN DTGTLVTASP KLYPHMWSWD
AAFIAIGLAH LDVNRALTEL DTLLSAQWSD GMIPHIVFTD ATSYFPGPDR WGTDSVPQRP
PHVRTSGICQ PPVHAIALRR IVDIARHVSR DDVELAETFA ARTWPALYRW HRWLARHRMS
ESCGLITIVH GWESGMDNSP RWDAPYAHVQ PGPDLPPYVR LDLLGVDDPN ERPSDAEYDR
YLWLIEQLRR ADYDPEVVPK TLDFRVGDVF TTALFAIACD DLVELAHELS LDAPDEVAEL
RTWAAHAREA VAHSADPDTG LAFDKDLRNG DTTRTTTVAA FSPLLCSALP EHLEHRLLTH
LTGPAWAGHP KFHAAVAPSV SPTEPGFDAR RYWRGPQWPV LVWLFSFAFQ RRGWTGLARN
WREQGLRLVA DGSFGEYYEP FTGEPLGSTQ QSWTAAVTLD WLCGRWWA
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