Gene Svir_34610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_34610 
Symbol 
ID8388784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3767590 
End bp3768144 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content69% 
IMG OID644977482 
ProductNodulation protein A (NodA) 
Protein accessionYP_003135251 
Protein GI257057419 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.313025 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGAGC TGCGCTGGAC ACTGGCCTGG GAGAGCGAGA CACCGAGGGA GCGACACGAG 
GGCCTCGCGC GGGCGCTGGC CTTGTCGTTC CCGGCCTACT CCGAGCTCTA CCGGGGAGCG
CGCAGTTGGG CTTTCGCCCG GCCGGAGGTG CGGATCATCG GGGAACTCGG TGACCACGTC
GTCGCACATC TGGGGGTGCT GCGGAGATTC CTCCGGGTCC TCGACACCGG TGCGAGTGTC
CTCGTCGGCG AGGTCGGACT GGTGATGGTC CACCCGGACT TCCGCGGTCG GGGGTTGGGC
AGGAGGCTGC TGGACGAGGC CACCGACGTG CTGACCGGCT TCGACCTCCC CTTCGGTTTC
CTGACCTGTC GACGTGGGAT CGTTCCGTTC TACGAACGCT GTGGTTGGCG AGCGACCACC
TCTCGGAGCA CCATGATCGA CGGTGACCAA CGGCCCGGGC CCGACCCCGC CGTCGTGATG
GTGCTGCCGG TCACCGCCGA GTGGCCCTCC TGGCCGGACG GACACGTGGT CGACCGCAAC
GGCCAGAAGG TGTGA
 
Protein sequence
MNELRWTLAW ESETPRERHE GLARALALSF PAYSELYRGA RSWAFARPEV RIIGELGDHV 
VAHLGVLRRF LRVLDTGASV LVGEVGLVMV HPDFRGRGLG RRLLDEATDV LTGFDLPFGF
LTCRRGIVPF YERCGWRATT SRSTMIDGDQ RPGPDPAVVM VLPVTAEWPS WPDGHVVDRN
GQKV