Gene Svir_34460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_34460 
Symbol 
ID8388770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3752132 
End bp3752656 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content67% 
IMG OID644977468 
Producthypothetical protein 
Protein accessionYP_003135237 
Protein GI257057405 
COG category[S] Function unknown 
COG ID[COG2013] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.727592 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGGCCC ACGCGGACAC CGTGTTGGCC CACAGTTTCG GAGTGCTGCG GTCGAAGAAG 
GGGAAGGGCT CCGAGCCGTC GATCTTCACG GCGCCGGCGG AGGGCGGCTG GATCGACCTC
GCACCGAAGC ATCCCGGTGA CGTCTACCCG CTGGAGTTGA GTGGCAGGCT GGGGTGGTCC
GTCGCGCACG ACGCGGTGTT GGCACGGCCC GCCACCGTGC GTCACGACCA TCCGTGGCCG
GCTCATCAGA GTCTTTTCGG CGGTGATTCC GGTTTTCTGA AGCACTTCAG CGGAACCGGC
CCATTGGTGC TCGCCTCCCG GGGACCGGTG GATTCGTTGA CGTTGAAGGC GGGTGAGGTG
CTCACGGTCA ACCCGTTGTT CGTGCTGGCT TACCCCGACA GCGTGCAAGT GCGGTTGCGG
GCACTGGATC CCGTCGAGCC TCAGTCGATC CGGACCGGTG CGGGTCTGGC CCTCGATGTG
GCGGGACCTG GGGCGATCTT CGTGCAGACA CGCGCCCGGG CGTAG
 
Protein sequence
MEAHADTVLA HSFGVLRSKK GKGSEPSIFT APAEGGWIDL APKHPGDVYP LELSGRLGWS 
VAHDAVLARP ATVRHDHPWP AHQSLFGGDS GFLKHFSGTG PLVLASRGPV DSLTLKAGEV
LTVNPLFVLA YPDSVQVRLR ALDPVEPQSI RTGAGLALDV AGPGAIFVQT RARA