Gene Svir_34250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_34250 
Symbol 
ID8388749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3727185 
End bp3727604 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content67% 
IMG OID644977447 
Producthypothetical protein 
Protein accessionYP_003135216 
Protein GI257057384 
COG category[R] General function prediction only 
COG ID[COG2018] Uncharacterized distant relative of homeotic protein bithoraxoid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.669608 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGCAT CAGCCCACCA GGGCAGCTTC GGATGGCTGG TCACCGACTT CGTGCGCCGG 
GTTCCGGGGG TGGCGCACGC TGTGGTGGTG TCGGCTGACG GGCTGCTACT GGCGAGCTCA
CAGGGGTTGC CCAGGGAACG GGCTGAACAA CTGTCGGCCG TGGCGTCCGG CCTCGTGTCG
TTGACCCACG GTGCCGCGCG ATGCTTCGAA GGCGGTGCGG TCAACCAGAC CGTGGTCGAG
ATGGAGCGCG GTTACCTGTT CCTCATGTCG ATCAGTGACG GGTCGTGTCT CGCCGTGCTG
GCGTCGCCTA CGGCTGACAT CGGCACGGTC GCCTACGAGA TGACCCTGCT CGTCGACCGG
GTCGGTCAGC GTCTTACCCC GGAATTACGG GCGCAGCTGC AAGGTGGCGT GCGTGGCTGA
 
Protein sequence
MTASAHQGSF GWLVTDFVRR VPGVAHAVVV SADGLLLASS QGLPRERAEQ LSAVASGLVS 
LTHGAARCFE GGAVNQTVVE MERGYLFLMS ISDGSCLAVL ASPTADIGTV AYEMTLLVDR
VGQRLTPELR AQLQGGVRG