Gene Svir_34120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_34120 
Symbol 
ID8388736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3714501 
End bp3715619 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content72% 
IMG OID644977434 
ProductABC-type sulfate/molybdate transport systems, ATPase component 
Protein accessionYP_003135203 
Protein GI257057371 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1118] ABC-type sulfate/molybdate transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.667673 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACTGC ACGCCGAGTT GACGTTGCGT AGGAAGACTT TCCGACTCTC GGTGACGTTG 
GATGTGCCCG ACGGCGGGGT GCTCGCGGTA CTCGGTCCGA ACGGTTCGGG AAAGTCGACC
GTGCTGAGCT GTCTGGCCGG GCTCGTGCGG GCCGAGCGGG CGCACGTGAG TTTGGGCGGC
CGGGTCCTCG ACGGGGTGGG TGTCCACGTG CCACCGCACG CCCGACGGAT CGGACTGCTC
GCCCAACATC CGTTGTTGTT CCCCCATCTG TCCGTACTGG ACAATGTGGC CTTCTCGCCC
CGGTGCCGTG GTGCGTCGAA GACCCGGGCG CGCACGGTGG CGCGACGGTG GCTTGCCGAG
GTCGGAGCGG AAAGTCTCGC CGATCAGGCC CCCACGGCGT TGTCCGGTGG GCAGGCACAG
CGGGTCGCGC TCGCGCGGGC CCTCGCCGGG GAACCGGAGC TGCTGTTGCT CGACGAACCG
TTCGCGGCGC TCGACGTCGA CGCCGCACCC GCCGTTCGCG GTGTCCTGCG ACGACTGCTG
CGTGGCGGAC CACGGGACGG ACACGGCGGC GACCGGGCGA TCACCACCGT GCTCGTCACG
CACGATCCGC TCGACGCTCT CACCCTCGCC GACCACGTCG TGGTGCTGGT CGACGGGCGC
ATCGTCGAAC ACGGGCCGAC CCGGCAGGTG CTCACGGCAC CGCGGACGGC TTTCACCGCC
CGCCTGGCCG GACTGAACCT CGTCGCGGGC GAGGCCGTAC GCACCGGAGC GGGCGTGGCG
GTGCGCACGC CCGGCGGACG GTTGTTCCAC GGGATGCCGG CGGAGGGTTT CGTCGACGGG
GACGCCGTGG TGGCCGTGTT CGCGCCGGAG GCGGTGACCG TCCAGCCGGG GGACACCCGG
GTGGTCGGCT CTCCGCGGAA CGTCGTGGAC ACCGTCGTCA CCGCCGTGGA GCCGCACGGC
CCCGTGGTGC GGCTGCGGAC CGGTGAGGGG ATCAGCGCCG ACCTCACACC CGCGTCGGTG
GCCGACCTCG CACTCGATCC CGGCACGCCC GTCCGGCTCG CGGTCAAGGC CGCCGCCGTC
ACCGTTCATC CGGCCCCGGA ATCGGCGCGG AGGCCATAG
 
Protein sequence
MTLHAELTLR RKTFRLSVTL DVPDGGVLAV LGPNGSGKST VLSCLAGLVR AERAHVSLGG 
RVLDGVGVHV PPHARRIGLL AQHPLLFPHL SVLDNVAFSP RCRGASKTRA RTVARRWLAE
VGAESLADQA PTALSGGQAQ RVALARALAG EPELLLLDEP FAALDVDAAP AVRGVLRRLL
RGGPRDGHGG DRAITTVLVT HDPLDALTLA DHVVVLVDGR IVEHGPTRQV LTAPRTAFTA
RLAGLNLVAG EAVRTGAGVA VRTPGGRLFH GMPAEGFVDG DAVVAVFAPE AVTVQPGDTR
VVGSPRNVVD TVVTAVEPHG PVVRLRTGEG ISADLTPASV ADLALDPGTP VRLAVKAAAV
TVHPAPESAR RP