| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_34020 |
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| Symbol | |
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| ID | 8388726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3705345 |
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| End bp | 3707081 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644977424 |
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| Product | arabinose efflux permease family protein |
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| Protein accession | YP_003135193 |
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| Protein GI | 257057361 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTCCG GCCGCAAGGG TAGACGGAAA TGGATCCCCG ATGAGCAGGT GAGCCACTCG
TCGACCCCTG ATCCCGAGGG CACCCGAGCT CCCCTCACGG CCGACAACGC ACCGACGGGT
TCGGTCCCGG TGCAGCCACC GCCCCCACCC CGAGGCGCCC GGCCCTACCG CTCGACACCC
CCGCGCGAGG CACTCCGCAC CCCGCCGCCA CGACGGTCCT CCGGCGGCCC CGGTACGACG
CCCCGCCACG GGTCTCGGCA CCGTTACGAG CGCTACGACA CCGACGGTTA CGCGCCTGGG
CAGCCACCCG AGGCGTTCGA CCCCGAACCG ACCACGACCC GTCACGGCCT CGAAGCCGCT
CACGAACGAC GTCTGCCGAA AAAGCTCACG GTCACCCGTG TCGCGGCGCT CCGCAGCCGC
GAGCTCAGCG GCCAGGCCAT CGCCGCGTTC CGTCGCGCCA CCACCGCCGA CGGGGCCGAC
AAATCCGGCC TGACCTCACT GACGTACGCG GTGATGCTGA ACTACGCCAG CGACGCCGCG
ATGGCCGTCG CGCTGGCCAA CACGCTGTTC TTCGCGGCCA GCAGCGGCGA GAGCCGAGGC
AAGGTGGCGC TCTACCTGCT CATCACCATC GCGCCGTTCG CCCTGGTGGC GCCGGTGATC
GGCCCGGCCC TCGACAGGAT CCAACGGGGA CGCAGGCTGG CGATGTGCGT GGCCTCGGCG
GGACAGGCGC TGATGTGCGT GCTCATGGCG CTCAACTTCG ACAGCTGGGT GCTCTACCCC
GCCGCGCTCG GCAAGATGGT GCTGTCGAAG TCGTTCATGG TGCTCAAGGC CGCCGTCACG
CCCAGGGTGC TGCCACCGGA GATCACCCTG TCGAAGACCA ACGCCAGACT CGCCGTGTTC
GGCCTCGCCG CCGGGGGCGT GTTCGGCGCG ATCGCCAGCG GGTTGAACTG GGCGTTCGGC
TCCTCGGGAG CGCTGTGGTT CACCGCGCTC ATCTGTGCTG TCGGCGCCGT GCAGGCCATG
CGCATCCCGT CGTGGGTGGA GGTCACCGAG GGCGAGGTGC CCGCGTCGCT GACGGCCAGG
CTGCCCAAGA AGGCCGGTCG TGCTCCGATG GCCCGGTACG TCGTGGTGGC GCTGTGGGGC
AACGGCTCCA TCCGCGTACT GACCGGGTTC CTCATGATGT TCGCCGCGTT CGCGGTGAAG
GCCGAGACCG AGAGCAGCGG GCAGACCGGG TTCATCCAAC TGCTGCTGCT CGGCATCATC
GGCGCCGCCG CCGGTGTCGG CGGGTTCCTC GGCAACGCGC TCGGCTCCCG CATGCAGTTC
GGCAAACCCG ATCAGGTCAT CATCGCGTGC CTGGCGAGCG TCTTGGCCTC CACCATCGTC
GCCACCGTCG CCTCCGGGTT GGCCACAGCC GCACTCGTCG GACTCGTCGG CTCCACCGCC
AGCTCGCTCT CGAAGAACAG CCTTGACGCC GTCATCCAAC AGGACATGCC GGAGGAGTCG
CGGGCGTCGG CGTTCGGCCG TTCCGAAACA GTGCTGCAAC TGGCCTGGGT CTTCGGTGGC
GCGATCGGGC TGTTGCTACC GCCCACCTAC TGGATCGGCT TCCTCGTGGT GGCCGTGCTG
TTGGCGCTCG GACTGGCGCA GACGTGGGCG GTCCGCAGCG GGAAGTCGCT GTTACCGACA
CTGCGACGCC GCCCGTCCCC CGGACCCGAT CCACGGCCGA GCCGGGTCGA CTCGTAG
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| Protein sequence | MRSGRKGRRK WIPDEQVSHS STPDPEGTRA PLTADNAPTG SVPVQPPPPP RGARPYRSTP
PREALRTPPP RRSSGGPGTT PRHGSRHRYE RYDTDGYAPG QPPEAFDPEP TTTRHGLEAA
HERRLPKKLT VTRVAALRSR ELSGQAIAAF RRATTADGAD KSGLTSLTYA VMLNYASDAA
MAVALANTLF FAASSGESRG KVALYLLITI APFALVAPVI GPALDRIQRG RRLAMCVASA
GQALMCVLMA LNFDSWVLYP AALGKMVLSK SFMVLKAAVT PRVLPPEITL SKTNARLAVF
GLAAGGVFGA IASGLNWAFG SSGALWFTAL ICAVGAVQAM RIPSWVEVTE GEVPASLTAR
LPKKAGRAPM ARYVVVALWG NGSIRVLTGF LMMFAAFAVK AETESSGQTG FIQLLLLGII
GAAAGVGGFL GNALGSRMQF GKPDQVIIAC LASVLASTIV ATVASGLATA ALVGLVGSTA
SSLSKNSLDA VIQQDMPEES RASAFGRSET VLQLAWVFGG AIGLLLPPTY WIGFLVVAVL
LALGLAQTWA VRSGKSLLPT LRRRPSPGPD PRPSRVDS
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