Gene Svir_34010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_34010 
Symbol 
ID8388725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3704469 
End bp3705302 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content68% 
IMG OID644977423 
Productglutamine cyclotransferase 
Protein accessionYP_003135192 
Protein GI257057360 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3823] Glutamine cyclotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.334448 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGAACCG TGCGTCGAGT GCTCAACCGA GTGATCAGTA CCGGAGCGGT CGCGCTCACC 
GTGATGACGG TGGTGGCGGC ATGCGGACAG CCCCCGAAAC AGCATTCCGG AGGGAACACC
GCGGGCGCGC CACGACCGGA ACGACTGCGG GTCGAGGTCG TCGACGTGCT CCCCCACGAC
CCCGAGGCGT TCACCCAAGG TCTCGAACTG GTCGACGACA CCCTCTATGA GGGGACCGGC
CTGGTCGGCG AGTCGACGCT GCGAGCGGGG CCACTCGGTG GCGAGCCCAC CACCGTCGTG
TCCTTGCCCG CGCCCCTGTT CGGCGAGGGC ATCACCGTGG TCGACGACCG GGTGTGGCAA
CTCACCTGGC GCGACGGCAT CGCCATCGAA CGCGACCGCA CCACGCTGGC CGAACTCCGT
CGCGTCCACT ACGAGGGCGA GGGGTGGGGA CTGTGCCACC AGGACGAGCG CGACCGGCTC
GTGATGAGCG ACGGCACGGC CACACTCACC TTCCGCGATC CCGACGACTT CTCCGTCCTC
GGCGCCGTGC AGGTCACCGA CACCGGCGAC CCGGTCGTCA ACCTCAACGA ACTGGAATGC
GTCGGCGACG ACGTCTACGC CAACGTCTGG CACACCGACG ACATCCTGCG CATCGACCCG
GACACCGGAT TCGTCACCGC TCGCATCGAC GCGTCCGACC TCCTCACCCC GGAGGAGGCG
GCCGACGCCG ACGTGCTCAA CGGCATCGCC GCACTCGACG GGTCGGACCA CTTCCTCGTC
ACGGGCAAGT TGTGGCCGAA GATGTTCACG GTGCGATTCG TCCCAACGGA CTGA
 
Protein sequence
MGTVRRVLNR VISTGAVALT VMTVVAACGQ PPKQHSGGNT AGAPRPERLR VEVVDVLPHD 
PEAFTQGLEL VDDTLYEGTG LVGESTLRAG PLGGEPTTVV SLPAPLFGEG ITVVDDRVWQ
LTWRDGIAIE RDRTTLAELR RVHYEGEGWG LCHQDERDRL VMSDGTATLT FRDPDDFSVL
GAVQVTDTGD PVVNLNELEC VGDDVYANVW HTDDILRIDP DTGFVTARID ASDLLTPEEA
ADADVLNGIA ALDGSDHFLV TGKLWPKMFT VRFVPTD