| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_33620 |
|---|
| Symbol | |
|---|
| ID | 8388686 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 3658706 |
|---|
| End bp | 3659293 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644977384 |
|---|
| Product | transcriptional regulator, tetR family |
|---|
| Protein accession | YP_003135153 |
|---|
| Protein GI | 257057321 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.807824 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTCGA CCGGCCCTCG CACTCGACGA CAGCGCGCGT TGCTCGCCGA GCTGGAGGAG
TTGTTCCTCG CCGAGGGTTT TTTGGCCTTC ACCCTCGACG ACCTGGCGGC GAAACTGCGT
TGCTCCAAGA CCACGCTGTA CGCGTTGGCG CCGAGCAAGG AGCAGCTCTC GGTGAAGGTG
GTCGCGCATT TCTTCAAGGG CGCGGCGGAG CGCATCGAGG CCAGGGTCGC GGGTATCGAC
GACGCCGCGG AGGCCGTGCG CACCTATCTG TCGGGGGTTT CCGCCGAACT GGAGCGGGCC
TCGGCGGCGT TCATGGCCGA TGTCGCCGCG TTCGAGCCCA CCCGGGCCGT CTACGCGTTC
AACTCCGAGG CGGCGGCTCG CCGGATCCGC CAGTTCATCG CCGACGGTGT CGAACAAGGG
GTCTTTCGGA ACGACTACGC CGACGCGATC GCCGAGATGG CCGGCATCCT CGTCGAGTCG
ATCCAGGCCG GGATCGTGGG GGCGCGGGCG CGCACCACCG ACGCCGAGGC GTTCGACGCT
TTAGCGGAGC TGCTGTTGGG CGGTTTGCGG TGGGGTGCTC CCGGCTGA
|
|---|
| Protein sequence | MRSTGPRTRR QRALLAELEE LFLAEGFLAF TLDDLAAKLR CSKTTLYALA PSKEQLSVKV
VAHFFKGAAE RIEARVAGID DAAEAVRTYL SGVSAELERA SAAFMADVAA FEPTRAVYAF
NSEAAARRIR QFIADGVEQG VFRNDYADAI AEMAGILVES IQAGIVGARA RTTDAEAFDA
LAELLLGGLR WGAPG
|
|---|
| |