Gene Svir_33560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_33560 
Symbol 
ID8388680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3651076 
End bp3651471 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content65% 
IMG OID644977378 
Producthypothetical protein 
Protein accessionYP_003135147 
Protein GI257057315 
COG category[R] General function prediction only 
COG ID[COG2018] Uncharacterized distant relative of homeotic protein bithoraxoid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0896592 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.486704 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGCCC ATGCCGGTGA CAACAGTTGG ATGTTGGAGC AGATCAGGAG CGTGCGTGGG 
GTGCGGCACG CGATCGTGCT CACCTCCGAT GGCCTGTTGA AGGTGAAGAC CGAACAGACC
AACGCCGACG TCGCCGACAA ACTCGCCGCC GCGTGCGCGG GACTGACCTC GCTCGGTAGA
GGTGTCGGTG ACGAGTTCGG CGCCGGTGGC GATCCCAAGC AGGTGATGGT GGAGTTCGAC
GGTGGGTTCC TGTTCGTGCG GGGAGCGGGT GACGGTTCAC GGCTCGCCGT CGTCACCGAA
CCGGTGATCG ACCCCGGTCT CATCGCGCAG CAGATGCAGC TTCAGGTGCT GCAGATCGGT
GAGCGGACCC TCAGCACGCC GACCCGCACT CGCTGA
 
Protein sequence
MVAHAGDNSW MLEQIRSVRG VRHAIVLTSD GLLKVKTEQT NADVADKLAA ACAGLTSLGR 
GVGDEFGAGG DPKQVMVEFD GGFLFVRGAG DGSRLAVVTE PVIDPGLIAQ QMQLQVLQIG
ERTLSTPTRT R