| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_33430 |
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| Symbol | |
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| ID | 8388667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3637318 |
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| End bp | 3639006 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644977365 |
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| Product | ABC-type dipeptide transport system, periplasmic component |
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| Protein accession | YP_003135134 |
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| Protein GI | 257057302 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.175667 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGA TCCCCACGGA CGCCGATCGC CGCACGGCTC GGGCGGGTGC CGGGTGGAAC
GCCGCGGTGG GAGCCGTGGT CAACCCGTCC CGACGACGTG GCGGCACCCT CCGCCTCGCC
TCCTCCGCCG ACGTCGACTC ACTCGACCCC GCGCGGACCT ACTACGTGTG GGTGTGGTTG
CTGCAACGGT TGCTCAACCG CACGCTGATG GCCTATCCGA CGGAGGCGGG CCCCGAGGGG
CTGACCCCGG TCCCGGACCT CGCCGAGGCA CCCGGAGAGG TCAGCGCGGA CGGACTGACG
TGGACCTACC GACTGCGTCC CGACGTGCGT TACGAGAACG GCAGGAAGGT GCGCGCGGCC
GACATCCGGC ACGCGGTGCA GCGTGTCTTC GCCCAGGACG TGTTGCCGGG CGGGCCCACC
TACCTCATCC CGCTGCTGGA CGACCCGGCC CGGCCGTATC CGGGGCCGTA CCGTGATCCC
GACGGCTTAC CCGCGGTCCA CACCCCGGAC GACCGCACGA TCGTGTTCCG ACTCCGCAGC
CCGTTCCCGG ACTTCGACCA CCTCATGGCC CAGCCCTGCA CCGCCCCGGT GCCGCAGTGG
GCGGACACCG GCGCCCGCTA CGGTGAGGCC CCACTGTGCT CCGGACCGTA CCGGGTGGCC
GAGTATCGAG CCGGGTCCCG ACTGCGGTTG GAGCGCAATC CACACTGGGA CCCGGCCACC
GACCCGATCC GTCCCGCCCT GCCCGACCGG GTGGAGTTGA CCATCGGCAT GGGGGTCGAC
GAACTGGACG ACCGACTGAT CGCCGGGGAG TTCGACATCA ACCTCGAGGG CCGTGGTCTG
CAGCACGCGG CGCAGCGACG AGTGTTGGCG GACCCGCTGC TACGGGCGAA CACGGACAAC
CCGGAGACCA ACTTCCTGCA GTACATCTCG ATCCAACCGC AGATCCCACC GTTCAACGAC
ATACACGTCC GCCGGGCGAT CCAGTTCGCC GCGGACCGGG TGGCCCTCCA GGAGGCCAGG
GGCGGGCCGA TCACCGGTGG GGACATCACC ACGGTGCTGT TCCCACCCCG GTTGGCGGCA
CACCAGGACC TCGACCTCTA TCCGGCGGGT CCCGATCTGC GTGGCGATCT CGACGCCGCC
CGCGCCGAAC TGGCGAGGGC CGGACTGCCG GACGGTTTCT CCGCCGTGAT CGGTACCCAA
CGGGGCAAGT TCCGACTGGT GGCCGACGCG CTGGCCGAAT CCGTCGCCCG GGTCGGCATC
CGACTGTCGG TGATGGAACT GGACGTGGCC ACCTACTTCA GCCAGGGCGT GGGCTCCCCC
GCCACGATCC GCGACCGCTC ACTCGGCCTG GTGGTCACCG ACTGGGGAGC CGATTTCCCC
ACCGAGTACG GGTTTTTGAC CCCGCTCGTG CACGGCGAAC AGATCAAACC GGCGGGTGGC
AACTGGAACC TGGCCGAGCT GGACGACCCG ACGATCAACA CGTTGATCGA CAGCACCCTC
ACCTGCTCCG ACCCCCACCA ACGGGTCGAA CTGTGGCGGA AGGTGGAACG GCGTGTGTTG
GAACTGGCGG TGTTCCTCCC GCTGGTCCAC GACAAAACGC TGCATTACCG CAATCCCTGG
GTCACCAACG TCTACGTGCA CCCGGCGTTC GGCCTCTACG ACGTGCAAGC CATGGGAGTG
GACAGTTGA
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| Protein sequence | MSTIPTDADR RTARAGAGWN AAVGAVVNPS RRRGGTLRLA SSADVDSLDP ARTYYVWVWL
LQRLLNRTLM AYPTEAGPEG LTPVPDLAEA PGEVSADGLT WTYRLRPDVR YENGRKVRAA
DIRHAVQRVF AQDVLPGGPT YLIPLLDDPA RPYPGPYRDP DGLPAVHTPD DRTIVFRLRS
PFPDFDHLMA QPCTAPVPQW ADTGARYGEA PLCSGPYRVA EYRAGSRLRL ERNPHWDPAT
DPIRPALPDR VELTIGMGVD ELDDRLIAGE FDINLEGRGL QHAAQRRVLA DPLLRANTDN
PETNFLQYIS IQPQIPPFND IHVRRAIQFA ADRVALQEAR GGPITGGDIT TVLFPPRLAA
HQDLDLYPAG PDLRGDLDAA RAELARAGLP DGFSAVIGTQ RGKFRLVADA LAESVARVGI
RLSVMELDVA TYFSQGVGSP ATIRDRSLGL VVTDWGADFP TEYGFLTPLV HGEQIKPAGG
NWNLAELDDP TINTLIDSTL TCSDPHQRVE LWRKVERRVL ELAVFLPLVH DKTLHYRNPW
VTNVYVHPAF GLYDVQAMGV DS
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