Gene Svir_33410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_33410 
Symbol 
ID8388665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3635107 
End bp3636090 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content67% 
IMG OID644977363 
ProductTaurine catabolism dioxygenase TauD, TfdA family 
Protein accessionYP_003135132 
Protein GI257057300 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.208572 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACCA CCGCCGAATC ACCGGTTATC GACTGCAGTG AGCATCACGA TCTACTGAAC 
GAGCTGCGGG CGACCCTGCC CTCGGTCCCC CGTCGGGACC TGAAGGCCTA CTTCGCGGCA
GCGTTGGAGG CCAGCAAGCG GCTGCCCGCC GACCTCGTGC GACGCCTGAC CGACTTCCGT
GACAACGGAA ACGAGGACGG GTACCTGTTG CTGCGTGGGC TTCCGAGGGA GGCCGATCTT
CCCGAGACCC CGAACAGCAC CCCCGCCCCC GTGGACCGCC CGCTGCTCGC CTCGGAAGCG
TGGCTGGCCC TGGTGGGCCG GGTGCTCGGC CTGCCGACGG GTTACCACGA GCTGCGTTTC
GGCACCGTCT ACCACGACAT CTACCCCTCA CCGGGTGCGC ACTACCTGTC GTCGGAGACC
TCCGAGACGC TGCTCGAGTT CCACACCGAG ATGGCTTACC ACCAGCACCA GCCGCAGTAC
GTCATGTTGG CCTGTTCCCG GTCCGACCAC GAGAACAAGG CGGCGACCCT GGTCGCCTCG
ATCCGCCGGG CCATCCAGCT GATCGACGAG AAGACCAAGT CCCGCTTGAT GGACCGACCC
ATCCCGTGCA ATGTGGACGT TTCTTTCCGA GGTGACGACC CGGAGCTGAA GAAGGGGCCG
CCCGCTCGCG TGTGCGTGCT CTCCGGCGAC CCCGAGGACC CGATGCTGGG ATACGACCGG
GAACTGCTGG CCCCGGACAA CGCCGAGGAC GAACAGGCCC TCAGCGTGCT GTCCAAGGCG
CTGGACGAGG TGACCAAGCC GGTCAAGCTG TCGCCGGGTG ACCTGTTGAT CGTGGACAAC
TACCGGACCA CCCACGCCCG GACCCCGTTC AAGCCGCGTT GGGACGGCCG GGACCGCTGG
CTGCACCGGA TGTACATCCG GGTGCCGGAG CGCATGTCCG GCACCGGCGA GGCCGGCGAC
GTCGTGAAGT TCGTGCCCCG GTAA
 
Protein sequence
MTTTAESPVI DCSEHHDLLN ELRATLPSVP RRDLKAYFAA ALEASKRLPA DLVRRLTDFR 
DNGNEDGYLL LRGLPREADL PETPNSTPAP VDRPLLASEA WLALVGRVLG LPTGYHELRF
GTVYHDIYPS PGAHYLSSET SETLLEFHTE MAYHQHQPQY VMLACSRSDH ENKAATLVAS
IRRAIQLIDE KTKSRLMDRP IPCNVDVSFR GDDPELKKGP PARVCVLSGD PEDPMLGYDR
ELLAPDNAED EQALSVLSKA LDEVTKPVKL SPGDLLIVDN YRTTHARTPF KPRWDGRDRW
LHRMYIRVPE RMSGTGEAGD VVKFVPR