Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_33170 |
Symbol | |
ID | 8388641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 3601689 |
End bp | 3602444 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644977339 |
Product | enoyl-CoA hydratase/carnithine racemase |
Protein accession | YP_003135108 |
Protein GI | 257057276 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.119109 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.701419 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAACA ACGCTGAGAT CGTGGAACTG GAGATCACCG ACCGCGTGGC GACCGTGTGG TTGAACCGAC CGAAACGGTT GAACGCGGTG ACTCCGGAAC TCGTCGAGGA CCTGATCACC ACGCTGCATC GGGTCGGCGC CGACACCGAC GTCGGTGCGG TCGTCCTGGC CGGACGGGGC CGGGCGTTCT GTGCGGGCCA CGATCTCAAG CAGCCTCCGC CGCGACAGGA GTCCCGTAGG CGGTTGGAGC GACTGCAGGA CGTCACCCGA GCCCTGCGGG GACTGCCGCA GCCCGTCGTG GCGGCCGTGC ACGGTTACGC GATCGGCGCG GGCGCGGAGT TCGCCCTGGG GTGCGATCTC GTCGTCGCGG CGGACGACGC CGTGTTCGCC TTCCCCGAGG TGGGGCTGGG GCTGAGCGTC ACGAACGCGG CCTCGCGGCT GCTTCCCCTG CTGGTCGGGC CGTTGAAGGC CAAAGAGCTC GTACTGCTGG GTGAGCGGAT CGACGCGGCG TCGGCCCACA CGCTGGGCCT GGTCAACACC GTGGTTCCGG TCGACGATCT CGCCGAACAC GTACACCGGA TGGCGCGCAC GCTCGCCGAC AAGCCGGCTT CCGCTCTCGC ATTGGCCAAA CGAGCGCTGG ACCACGGCAT CGACGGCCCT TTGGAGACGG CCCTCGAACT GGAGGTCAGT CACGCACTGA TCACCGAACA CTCGCCCGAG GTGGCCCGAT CGAAGGAGGA GTTCGATGAG CGCTGA
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Protein sequence | MRNNAEIVEL EITDRVATVW LNRPKRLNAV TPELVEDLIT TLHRVGADTD VGAVVLAGRG RAFCAGHDLK QPPPRQESRR RLERLQDVTR ALRGLPQPVV AAVHGYAIGA GAEFALGCDL VVAADDAVFA FPEVGLGLSV TNAASRLLPL LVGPLKAKEL VLLGERIDAA SAHTLGLVNT VVPVDDLAEH VHRMARTLAD KPASALALAK RALDHGIDGP LETALELEVS HALITEHSPE VARSKEEFDE R
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