Gene Svir_33150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_33150 
Symbol 
ID8388639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand- 
Start bp3600503 
End bp3601186 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content67% 
IMG OID644977337 
ProductMn-dependent transcriptional regulator 
Protein accessionYP_003135106 
Protein GI257057274 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.011235 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.509126 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGCTG GCTCGAACCG TCGGTCGGCC TCGATCGAGG ACTACGTGCG GACCATCTAC 
GGCCTGGAGG AACGCGGCGA GGCCGTGACG AACGCGGCTT TGTCCTCGCG GCTGGAGGTG 
AGTCCGTCCT CCGCGTCGGG GATGGTGGCC AAACTGGCTC GGCAAGGCCT GGTCGAGCAC 
GTGCCGTATC GAGGGATCGA GCTGACCTCT GAGGGGCGGT TGCTCGCTCG GTCGGTGCTA 
CGCAGGCACC GGCTCATCGA GACGTTCCTG GTGTCCGAGC TCGGTTACAC GTGGGACGAG 
GTGCACGCTG AGGCGGACTT GCTCGAACAC GTGGTGTCCG ACCTGCTGAT CGAGCGCATA 
GCGGCGAAGC TCGGTAACCC GGAACGGGAC CCGCACGGTG ATCCGATCCC GGCCGTGGAC 
GGTTCGGTGG AGGAGGTGTC CACCAAGCTG CTGGAGGACC TGCCCGCCGG CGCCGTGGGC 
GAGATCGTAC GGGTGTGGGA CACCGACCCC GAACTACTGC GTTACCTCGC CGAACGCTCC 
ATCGGCCTGG GCAAACGCAT CGAGGTGGTC GAGCGACAGC CGTTCGGTGG GTCGATCATC 
GTGCAGATCG GTCAACCGCC CCACGCCGCC ACCCATGCTC TCGGTAGGGA GATCGCGCAG 
GCGCTGTCGG TATCGACGCG CTAG
 
Protein sequence
MGAGSNRRSA SIEDYVRTIY GLEERGEAVT NAALSSRLEV SPSSASGMVA KLARQGLVEH 
VPYRGIELTS EGRLLARSVL RRHRLIETFL VSELGYTWDE VHAEADLLEH VVSDLLIERI 
AAKLGNPERD PHGDPIPAVD GSVEEVSTKL LEDLPAGAVG EIVRVWDTDP ELLRYLAERS 
IGLGKRIEVV ERQPFGGSII VQIGQPPHAA THALGREIAQ ALSVSTR