| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_32700 |
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| Symbol | |
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| ID | 8388594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3551377 |
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| End bp | 3552042 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644977297 |
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| Product | SAF domain-containing protein |
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| Protein accession | YP_003135067 |
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| Protein GI | 257057235 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.601677 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAGCA CGCGGGCTCG CGGGCGGCGG GAACGGTTCA CACGACTCGA ACGACTGCGT
TCCCGGCTGC GTGGACATCC GCTCATCCTG CTCCGTCGCG CATTGGCCGC GGCGTTGCTG
CTGGTCGCCG CGGTGTTGGC GGTCACGCCG GGAACGGACC GTGAACCGCG TGTCCCCGTT
CTCGTCGCGG CGAGGACCCT GCCACTCGGT TCGACCCTGT CCGAGGACGA CGTCCGGGTC
GCCGAAGTCC CCGCGGAGCT TCGTCCGGAC GGCGCTCTCG TCACTCCGGA TCAGGCGGTG
GATCGCCGCC TCGTAGGCGC GGCGCGTGAG GGCGAGCCGT TGACCGATCT GCGCTTCCTC
GACGCACGCA ACGGACCACC CGGGTCCACC ACCGTGCCGC TACGACTCAC CGACGCCGGG
ATGACCCGCC TGTTGCGGTC GGGCACCCGT GTCGACGTGG TGACCCCCGG TGAAGGTGTA
CGGCAGGCAC GTGTCCTCGC CGAGAACGCC ACCGTGGTGA GCGTCGTCAC ACCCGAGCCG
GACCGGGACG ACAGCCCACT GGCCCGGCAG AACACGCCCC TGGTCTTGGT GTCCGTCCCC
GATGAGCAGG CTCCCCACGT GGCTGCCGCC GCGCTGGGCA ACCCGGTCAC CGTGACACTC
CGATGA
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| Protein sequence | MHSTRARGRR ERFTRLERLR SRLRGHPLIL LRRALAAALL LVAAVLAVTP GTDREPRVPV
LVAARTLPLG STLSEDDVRV AEVPAELRPD GALVTPDQAV DRRLVGAARE GEPLTDLRFL
DARNGPPGST TVPLRLTDAG MTRLLRSGTR VDVVTPGEGV RQARVLAENA TVVSVVTPEP
DRDDSPLARQ NTPLVLVSVP DEQAPHVAAA ALGNPVTVTL R
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