Gene Svir_32620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_32620 
Symbol 
ID8388586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3545006 
End bp3545860 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content71% 
IMG OID644977289 
Productpredicted esterase of the alpha-beta hydrolase superfamily 
Protein accessionYP_003135060 
Protein GI257057228 
COG category[R] General function prediction only 
COG ID[COG1752] Predicted esterase of the alpha-beta hydrolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.391001 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGACG ACGGCAGGGC ACTCGTACTC GGCGCGGGTG GCATCACCGG AATCGCATGG 
GAACTGGGCC TGGTGGCCGG ACTCGCCGAG CACGGCGTGG ATCTCACATC CGCCGACCTG
GTGGTCGGAA CCTCCGCGGG CGCGGTGGTC GGCACCCAAT TACCCGGCGG GATCGACCTG
CACACGCGCT ACCTGAGGGA ACTGGAGGGC GCTCGGGGCG AGCAGCCGGG CAGGATGGGC
CTGCGCAACC TGGTGCGGCT CGGGCTCGCC GGATTCCACG CCAACGACCC TGTGGACGCA
CGCAGGCGCA TCGGCGCGCT CGCACTCGCC GCCCGGACCG AGTCCGAGGC GCAACGGCGC
AAGACCGTCG CATCGTGGCT CGGCGGCGTC GAGGGTTGGC CCGACAAGCA CTTGGAAGTC
ACCGCGGTCA ACGCGGTCAC CGGCGAGTTC GTGGTGTTCG ACAAAGACGG TGGCGTCGAT
CCGGTGGCCG CGGTCGCCGC GAGTTGTGCG TCCCCCTGTG TGCGCCCGCC GTCCACCGTC
GGCGACGCCC GCTTCATCGA CGGTGGTATC CGCTCCCCGT CCAATGCCGA CCTCGCAGCG
GGCTACGGAC GGATCGTGCT GCTCACTCCG GTCGAACACG GCGGCGAGGG AATGGGTTCC
CCCGCGGAGG AAGCCGCGAG ACTTGCGGAA ACCGCCCGGC TCGTCCACAT CGCACCCGAC
GCCGAGGCAC GTCCACGGGT CGGGCGCACC GTGCCGCAGA TGCTCCGACC GGCGCGGCGG
GCGGAAGCCG CGAAAGCGGG GTATGCACAG GCCGCGCGGG TCGCCGACCA GATCGCCCGC
GTCTGGACGA CCTGA
 
Protein sequence
MTDDGRALVL GAGGITGIAW ELGLVAGLAE HGVDLTSADL VVGTSAGAVV GTQLPGGIDL 
HTRYLRELEG ARGEQPGRMG LRNLVRLGLA GFHANDPVDA RRRIGALALA ARTESEAQRR
KTVASWLGGV EGWPDKHLEV TAVNAVTGEF VVFDKDGGVD PVAAVAASCA SPCVRPPSTV
GDARFIDGGI RSPSNADLAA GYGRIVLLTP VEHGGEGMGS PAEEAARLAE TARLVHIAPD
AEARPRVGRT VPQMLRPARR AEAAKAGYAQ AARVADQIAR VWTT