Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_32270 |
Symbol | |
ID | 8388551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 3498854 |
End bp | 3499270 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644977254 |
Product | hypothetical protein |
Protein accession | YP_003135026 |
Protein GI | 257057194 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.265116 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.314154 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGCTG AGTCACCTTC ACCACAGTCG CCCGGGGACA CCACCGGGCA GGGACGCCTT GCGGCTTTCC GCAAGGCCGA AGAACTGGTG CGGCGACGAC CACTCGACGC ACTCGCCCTA CTCAAACCCC TACTCGACTC CGATCCCGAC AAGCCGAGTG TCCAGTTGCT CGCGGGGCGT GCGTATTTCC ACTCGGCACA GCTGAACCGC GCAGAACGCG CGTTCACCAA GGTCGTGGAA CTCGACCCGT CGGACCACTA CGCGCGGTTC GTGCTCGGCC GAACACTGCA ACGCCTCGGC CGACTGATCG AGGCACGCGC CCAGCTCCGC ATGGCCACCG CGATGAACCC GGTGCCCGAG TACCAGGACG CGCTCGGTGA GGTCAGCGCC CGGGTGGCGT TGAGCCGCGA CGACTGA
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Protein sequence | MVAESPSPQS PGDTTGQGRL AAFRKAEELV RRRPLDALAL LKPLLDSDPD KPSVQLLAGR AYFHSAQLNR AERAFTKVVE LDPSDHYARF VLGRTLQRLG RLIEARAQLR MATAMNPVPE YQDALGEVSA RVALSRDD
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