Gene Svir_31820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_31820 
Symbol 
ID8388506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3451532 
End bp3451999 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content71% 
IMG OID644977209 
Producttranscriptional regulator, AsnC family 
Protein accessionYP_003134982 
Protein GI257057150 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.760831 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCTGG ACGCCCTGGA CGCGCGGCTG TTGTTGCTGT TGACCGACGC ACCCCGTCTG 
GGCGTTCTGG AGTGCGCCCG TCGACTCGGG GTGGCCCGCG GCACCGTGCA GGCACGGCTC
GACCGGCTCA CCGCCGCCGG GGTGCTGAAG GGGTTCCCGC CCGAACTCGA CCTCGCGACG
ATGGGCTACG GGTTGACCGC CTTCGCCGTG TTGGAGATCG CGCAGGGGCA GCGGGCTGAA
GTGGCCTCCG CGCTGGCCGC CATCGACGAG GTGTGTGAAG TGCACGCGAC CACCGGACAG
GGCGACCTGT TCGTCCGGCT CGTCGCTCGT TCCAATGACG ACCTGCAGCG GGTCATCGAC
GAGGTCGTCA GCGTCCCCGG CGTGCGCAGG ACGGCGACGT CCATCGCGTT GTCGACCCCG
GTGCCGCCCC GGGTGCGACC ACTGCTGGAG CGCATCGCCG CCGGTTAG
 
Protein sequence
MRLDALDARL LLLLTDAPRL GVLECARRLG VARGTVQARL DRLTAAGVLK GFPPELDLAT 
MGYGLTAFAV LEIAQGQRAE VASALAAIDE VCEVHATTGQ GDLFVRLVAR SNDDLQRVID
EVVSVPGVRR TATSIALSTP VPPRVRPLLE RIAAG