| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_31590 |
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| Symbol | |
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| ID | 8388483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3426186 |
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| End bp | 3426875 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644977186 |
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| Product | channel protein, hemolysin III family |
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| Protein accession | YP_003134959 |
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| Protein GI | 257057127 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGTAG CGACGCACAA ACAGAACGAA GCAACACCGT CCGACGTCGT CGACACCCGT
CCGCGGCTTC GTGGGCACAT CCACTTCTGG AGTTTCTTCG GCGCGGTCGC GGCGGGTGCC
ACGCTGATCG CCCTGGCCGC GTCGACCGTG TCGGGGCTCG CCGCCCTGGC GACGTCGATC
TACGGGGTCA CGGTGCTCGG CGTGTTCGGG GTCAGCGCCT TGTACCACCG GCGGATCTGG
AGCCCCAAGG CGTACGCGTG GATGAAACGC GCCGACCACT CGATGATCTT CCTGTTCATC
GCGGGCACCT ACACGCCGTT CACACTGTTG GCGATGTCCC AGCCGACCGG GTACGTCGTG
CTCGGCGTGG TGTGGGGTGG CGCGGTCGCG GGTGTCGCGT TGAAGATGTT GTGGCCGACG
GCGCCGCGTT GGCTCGGCGT GCCCATCTAC ATCGCGCTGG GCTGGGTCGC GATCTTCGTG
CTGCCGGAGC TGGCGCACAA CGCGGGCGTG GCGGCGCTGG TGTTGCTGCT CGTCGGCGGG
GCCCTCTACA CGGTGGGGTC GGTTTTCTAC GCCACCCGTT GGCCGAACTA CTGGCCCAAG
ACCTTCGGGT ACCACGAGTT CTTCCACGCG TGCACGGTGG CGGCGGCCAT CACGCACTAC
ATCGCGATCT GGCTGGCCAT GTACGCCTGA
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| Protein sequence | MSVATHKQNE ATPSDVVDTR PRLRGHIHFW SFFGAVAAGA TLIALAASTV SGLAALATSI
YGVTVLGVFG VSALYHRRIW SPKAYAWMKR ADHSMIFLFI AGTYTPFTLL AMSQPTGYVV
LGVVWGGAVA GVALKMLWPT APRWLGVPIY IALGWVAIFV LPELAHNAGV AALVLLLVGG
ALYTVGSVFY ATRWPNYWPK TFGYHEFFHA CTVAAAITHY IAIWLAMYA
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