Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_31550 |
Symbol | |
ID | 8388479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3421004 |
End bp | 3421579 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644977182 |
Product | transcriptional regulator |
Protein accession | YP_003134955 |
Protein GI | 257057123 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGACG ACCCCGTACT GACCCCGGAC GCCGAGCGAG TGCTCGAAGT GGCGAGAAAG CTGTTCCGCG ACCACGGTAT TCACGCTGTC GGGGTCGAGC AGCTCGCCCA TGAGGCCGGT GTCACCGAGA AAACGTTCTA CGAGCGGTTC GGTTCCAAGG ACGCACTCGT CGCCGAGTAC CTCGAACGAT GGGGCGAGCG CTATCGCGAG CATGTGCGCG CGGTGGTCGA ACGTCGGGGT CGGTTCTCAC CCGCACAGCG GCTGTTGTTG CTGTTCGACG CGGTGGAGGA GTGGATCGCG ACGGAGGGTC CACACGACTG CGCGTTCGTC AACGCGCAGG CCGAACTGTC CGACGCCGGC CACCCCGCCC GCGAGGTGAT CCGGGCGCAG AAACAGTGGA TGGTGGACTA TCTGCGAACT CTCGCGCGGG ACGCGGGCGT GCGTAACGCG CGCAAATTGG CGACCTCGTT GTTGATACTG CTGGAGGGTG CCATCGTCAC CGCCTCGTTC GGGATCGTGC CCGGCGCGGT GGGTAACGCC AAGGAAGTGG CCAGACAGCT CGTCGAGGCG GGTTGA
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Protein sequence | MRDDPVLTPD AERVLEVARK LFRDHGIHAV GVEQLAHEAG VTEKTFYERF GSKDALVAEY LERWGERYRE HVRAVVERRG RFSPAQRLLL LFDAVEEWIA TEGPHDCAFV NAQAELSDAG HPAREVIRAQ KQWMVDYLRT LARDAGVRNA RKLATSLLIL LEGAIVTASF GIVPGAVGNA KEVARQLVEA G
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