Gene Svir_31550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_31550 
Symbol 
ID8388479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3421004 
End bp3421579 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content66% 
IMG OID644977182 
Producttranscriptional regulator 
Protein accessionYP_003134955 
Protein GI257057123 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGACG ACCCCGTACT GACCCCGGAC GCCGAGCGAG TGCTCGAAGT GGCGAGAAAG 
CTGTTCCGCG ACCACGGTAT TCACGCTGTC GGGGTCGAGC AGCTCGCCCA TGAGGCCGGT
GTCACCGAGA AAACGTTCTA CGAGCGGTTC GGTTCCAAGG ACGCACTCGT CGCCGAGTAC
CTCGAACGAT GGGGCGAGCG CTATCGCGAG CATGTGCGCG CGGTGGTCGA ACGTCGGGGT
CGGTTCTCAC CCGCACAGCG GCTGTTGTTG CTGTTCGACG CGGTGGAGGA GTGGATCGCG
ACGGAGGGTC CACACGACTG CGCGTTCGTC AACGCGCAGG CCGAACTGTC CGACGCCGGC
CACCCCGCCC GCGAGGTGAT CCGGGCGCAG AAACAGTGGA TGGTGGACTA TCTGCGAACT
CTCGCGCGGG ACGCGGGCGT GCGTAACGCG CGCAAATTGG CGACCTCGTT GTTGATACTG
CTGGAGGGTG CCATCGTCAC CGCCTCGTTC GGGATCGTGC CCGGCGCGGT GGGTAACGCC
AAGGAAGTGG CCAGACAGCT CGTCGAGGCG GGTTGA
 
Protein sequence
MRDDPVLTPD AERVLEVARK LFRDHGIHAV GVEQLAHEAG VTEKTFYERF GSKDALVAEY 
LERWGERYRE HVRAVVERRG RFSPAQRLLL LFDAVEEWIA TEGPHDCAFV NAQAELSDAG
HPAREVIRAQ KQWMVDYLRT LARDAGVRNA RKLATSLLIL LEGAIVTASF GIVPGAVGNA
KEVARQLVEA G