Gene Svir_31360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_31360 
Symbol 
ID8388460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3401186 
End bp3402415 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content65% 
IMG OID644977165 
Producthypothetical protein 
Protein accessionYP_003134938 
Protein GI257057106 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG4088] Predicted nucleotide kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.559839 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCATCT TCCGCGGCCT GCCTGGGTCC GGGGAGACCA CCCACGCCCG CGAGCTTCGA 
TTCGCCCTCG ACGGCACCGT GGTCGGCTGT GACCATCTCC GCGAGTTGTT GTTCGGCCTC
GACCGCTACC GACCGTCGAA CGAGGCAGAG GCGCAGGTGA CCAAGACACA GGACACGATG
ATCCGGGACG CACTCCGAGC CGGCCGCAAC GTGTCCGTAG ACGACATGAA CCTCCGCACC
CGGTACGTCC GGCGTCTGCT GGGGATCGCA CGAAGCGAGG CAACGCCCGT CCAGATCATC
GACCTGACGG ACGTGCCACT GGAGGAGTGC ATCAAGCGGG ACCAGGACCG GGATTCTCCG
ATTGGAGAGG CTGTGATCCG AGACCTCCAC CGCAGGTTCG TCGCGGGCCA GCCCTACCCG
CTGCCGGTGC CCGAACCGGC CGATATCGGC TCTGGGACTG GCGACCTGTA CATCCCGCCG
AAGTACGGCG AACCCGCGGT GATCGTGTCG GTGATGGTGC TCGTGGGCGT GTTGGTTCAT
CTACATCTTC TGGCGCTCGT TCTACCGTCT GATCATGCGG CAGCCGGTAT TCGGTACATC
GGAAAAGCAG AGCGTATAGA AAAAGGCCCC TTCCCGTCGG GAAGGGGCCT TTTTTGTGTT
TCACGGGAGT TATGCGCCGA CAGACGCCGG CCGGGATTCA TGCCAACCCA TGAGCGACAT
TCCTCGAACT CCACGCCGGT AGGCGTCGAT CCCGGCGGCC GGGTATTCGA TGATGTTTGC
GGGCAGGCTG CGGAAGTCGA ACCAGCCCAG TCCGTGACAC TTCTCGGGTT CCCGGTTGGT
GGGCTCGCCG ATCCATCGTG TCGTGGCGAA GAAGTGCCCG ATCCGGGCTT CAGGGCCAGA
GCCCGCGACG TGGATGCTGT GAACGTGTTC GAGGTCGGCC GGGTTGATCA AGACCCCGAC
CTCTTCTTCA GCCTCGCGGG CGGCTGCGGT GAAGATGTCC TCGCCCGCGT CGAGCTTGCC
GGATGGCAGA TGCCACATTC GGTCCCACTG GCCGCCCCGT CGCTCAGTGA GGAGCAGTTC
GGCGTCGCGG ATCAGGAGAA CGTGGACATC GATGATGTGG CGATCGGGCA CGGTGGTCGG
TCCTCGTGTT CGTGGTCTGC GGCCATGCCG GGCGCTCACC AGGCGGGTAG CGCGCCCGGA
CAGGCGGCAG CTTACGTCGT GACGTCCTGA
 
Protein sequence
MFIFRGLPGS GETTHARELR FALDGTVVGC DHLRELLFGL DRYRPSNEAE AQVTKTQDTM 
IRDALRAGRN VSVDDMNLRT RYVRRLLGIA RSEATPVQII DLTDVPLEEC IKRDQDRDSP
IGEAVIRDLH RRFVAGQPYP LPVPEPADIG SGTGDLYIPP KYGEPAVIVS VMVLVGVLVH
LHLLALVLPS DHAAAGIRYI GKAERIEKGP FPSGRGLFCV SRELCADRRR PGFMPTHERH
SSNSTPVGVD PGGRVFDDVC GQAAEVEPAQ SVTLLGFPVG GLADPSCRGE EVPDPGFRAR
ARDVDAVNVF EVGRVDQDPD LFFSLAGGCG EDVLARVELA GWQMPHSVPL AAPSLSEEQF
GVADQENVDI DDVAIGHGGR SSCSWSAAMP GAHQAGSAPG QAAAYVVTS