Gene Svir_31310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_31310 
Symbol 
ID8388455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3397236 
End bp3397934 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content68% 
IMG OID644977160 
Productubiquinone/menaquinone biosynthesis methylase 
Protein accessionYP_003134933 
Protein GI257057101 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.060018 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.471088 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGACG CCCTCTACGC GGATCCGCGG CTCGCTCCCC TGTACGACCC GCTCGATCCC 
GATCGCAGTG ACCTCGACGC CTACCTTGCG ATGGTCGAGG AGTTCGAGGC GCGCAGCGTG
CTGGACGTCG GGTGCGGTGC GGGGACGTTC GCGTGTCTGC TCGCCGAGCG TGGTCTCGAC
GTGGTGGGTG TCGAACCGGC CGCCGCGTCC CTCGACGTCG CACGGGGTAA GTCCCTCGCC
GAGCAGGTGC GATGGCTGCA TGGAGACGCG ACGACGTTAC CGCCGTTGGC GGTGGGTCTT
GCCACCATGA CCGCCAACGT GACCCAGGTG TTCCTCACCG ACGCCGACTG GCACGAGACG
TTGCGCGGTA TTCACGCGGC GTTGCGACCG GGCGGGAGGC TGGTGTTCGA AACGCGTGAC
CCGGCGTGGC GCGCGTGGAC CGGTTGGACC CCCGAACGCA CCTTCATCGA GGCCGACATT
CCCGGTACGG GCGTGGTCCG CACGTGGTGT CAGGTGTTGG ACGTGGCCGA GCCGCTGGTG
TCGTTCCGCT GGACCTACGT GTTCGACACC GACGGGACCA CACTCACCTC CGACTCGACA
CTGCGATTCC GTGGCCGGGA CGACATCGAG CGGTCTCTAC GGGAGACGGG GTTTCGGACG
GAGGGGCGTC CGGGACGTTC CGGATCGTCC CGGGTGTGA
 
Protein sequence
MPDALYADPR LAPLYDPLDP DRSDLDAYLA MVEEFEARSV LDVGCGAGTF ACLLAERGLD 
VVGVEPAAAS LDVARGKSLA EQVRWLHGDA TTLPPLAVGL ATMTANVTQV FLTDADWHET
LRGIHAALRP GGRLVFETRD PAWRAWTGWT PERTFIEADI PGTGVVRTWC QVLDVAEPLV
SFRWTYVFDT DGTTLTSDST LRFRGRDDIE RSLRETGFRT EGRPGRSGSS RV