Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_30410 |
Symbol | |
ID | 8388365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3292723 |
End bp | 3293436 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644977070 |
Product | predicted phosphatase |
Protein accession | YP_003134843 |
Protein GI | 257057011 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.990761 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.161888 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGGGA AAACACGGAA ACGACTGGTG TTGTGGGACA TCGACCGCAC GTTGATCGAG AGTCGCGGCG TGGGTCGGAT GGTCTACGAA CGGGTCTTTC CCGAGGTCGT GGGAAAGCCA CTGCGGGAGA TGCCCCTCGT TCACGGGCGT ACCGAACTCG ACATCATGTA CGAGGCCTTG CGCAGCCACG ACGTCGAACC CACCGAGCAC CTCTTCCGAC GTCTTTCGGC CGCGCTCGCT GAGGGCTTCC GTGCCGTGGC CGACGAGCTC GCCGAACGGG GCAGGGTGCT TCCCGGCGTG CGGAATGCGT TGGCCGGTCT CGCGGCCGAA CCGACGATGC ACCAGGGGGT GCTCACCGGC AACACCGCCG AGGTCGCCCG GATCAAACTC GAGGCTTTCG GCCTCGACCG GCACCTCGAC CTGTCGACGA GCGCATTCGG TGACGACCAT CGGGAACGGC CTGAACTCGT CACCATCGCG AGGGAACGCG CCGCCCGGCG GTTCCGCACC CCGATCCCGG TCGAACACGT CGTCCTGATC GGAGACACAC CGGCGGACGT GCACGCGGCC CTCAGCACCG GTGCGCGTGT CATCGCCGTG GCCACCGGTG TGTACTCCGT GGACGAATTA CTCGCGGCGG GTGCGTCGTC GGTGTTGGAG ACCCTGACTC CGTCCCGATT CCGACGAGCC CTGGAAAGCG TCTTCTCGGA ATGA
|
Protein sequence | MTGKTRKRLV LWDIDRTLIE SRGVGRMVYE RVFPEVVGKP LREMPLVHGR TELDIMYEAL RSHDVEPTEH LFRRLSAALA EGFRAVADEL AERGRVLPGV RNALAGLAAE PTMHQGVLTG NTAEVARIKL EAFGLDRHLD LSTSAFGDDH RERPELVTIA RERAARRFRT PIPVEHVVLI GDTPADVHAA LSTGARVIAV ATGVYSVDEL LAAGASSVLE TLTPSRFRRA LESVFSE
|
| |