Gene Svir_30410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_30410 
Symbol 
ID8388365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3292723 
End bp3293436 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content66% 
IMG OID644977070 
Productpredicted phosphatase 
Protein accessionYP_003134843 
Protein GI257057011 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.990761 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.161888 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGGA AAACACGGAA ACGACTGGTG TTGTGGGACA TCGACCGCAC GTTGATCGAG 
AGTCGCGGCG TGGGTCGGAT GGTCTACGAA CGGGTCTTTC CCGAGGTCGT GGGAAAGCCA
CTGCGGGAGA TGCCCCTCGT TCACGGGCGT ACCGAACTCG ACATCATGTA CGAGGCCTTG
CGCAGCCACG ACGTCGAACC CACCGAGCAC CTCTTCCGAC GTCTTTCGGC CGCGCTCGCT
GAGGGCTTCC GTGCCGTGGC CGACGAGCTC GCCGAACGGG GCAGGGTGCT TCCCGGCGTG
CGGAATGCGT TGGCCGGTCT CGCGGCCGAA CCGACGATGC ACCAGGGGGT GCTCACCGGC
AACACCGCCG AGGTCGCCCG GATCAAACTC GAGGCTTTCG GCCTCGACCG GCACCTCGAC
CTGTCGACGA GCGCATTCGG TGACGACCAT CGGGAACGGC CTGAACTCGT CACCATCGCG
AGGGAACGCG CCGCCCGGCG GTTCCGCACC CCGATCCCGG TCGAACACGT CGTCCTGATC
GGAGACACAC CGGCGGACGT GCACGCGGCC CTCAGCACCG GTGCGCGTGT CATCGCCGTG
GCCACCGGTG TGTACTCCGT GGACGAATTA CTCGCGGCGG GTGCGTCGTC GGTGTTGGAG
ACCCTGACTC CGTCCCGATT CCGACGAGCC CTGGAAAGCG TCTTCTCGGA ATGA
 
Protein sequence
MTGKTRKRLV LWDIDRTLIE SRGVGRMVYE RVFPEVVGKP LREMPLVHGR TELDIMYEAL 
RSHDVEPTEH LFRRLSAALA EGFRAVADEL AERGRVLPGV RNALAGLAAE PTMHQGVLTG
NTAEVARIKL EAFGLDRHLD LSTSAFGDDH RERPELVTIA RERAARRFRT PIPVEHVVLI
GDTPADVHAA LSTGARVIAV ATGVYSVDEL LAAGASSVLE TLTPSRFRRA LESVFSE