Gene Svir_30300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_30300 
Symbol 
ID8388354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3282786 
End bp3283676 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content59% 
IMG OID644977059 
Producthypothetical protein 
Protein accessionYP_003134832 
Protein GI257057000 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.92988 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.817284 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACA AGCCGATCGC GCTGAAGGTG CTGTTGCGAC AAAAACACCT GCAAGGGCAC 
CGCGCGTTCT GCAAGGAGTA CGACAAACTC GCGGAACAGA TAGAGCCTGA GCTGGTGGGG
AGCTGGCCGA GCAGAGCCCA GTTCTATCGC TGGCTCGCCC GGGATCTTCA AGGACTGCCC
TACGCCCACC ACTGCCGCAT ACTCGAAGCG ATGTTCCCCG GCTGGACCGC TGAACAACTC
TTCCAGGAAC ATACGGGCGA CATCATCCTC GGCTCAGGGG CTCTGCCTAC CGCGCGAGAC
AACGTTGTCC ACTCACCGAA ACCGGTGATG CCGAGTTCAC AAGGCATGGC CGATGTAACC
GCGGTCTTCC CTAGTCGTTC CACGTTTTCG CACGAACTTC CACCGCACAA GCTCTTCGAC
GGTGCAAAAC GAATCGGCAT GGTCGGCCTC TCACTCAACC TGCTCTGTCA GAACTATCCC
GACCGCTTTC TGCTCGATCT CCTCGAATCC GGCACCGTTG TCCAATGCCT GTTCCTCGAT
CCTTCCGGCC GTTACATCAA GGAAAGGGAG CGAGAGGAAT CGCACCTCGA GGGTGTGCTG
TCCACACTCA CGAGACTCAA CATTCAAACC TTGCAACGTC TCCACGACAA ACTCTCATCC
GGAGCCCGCG AAAACCTGCG TATCCGCACT TACGACGAGG CCGTGCGGTT CAACATCACC
GTCATCGACG ACGCAACCTG CGTCGTGCAG CCCTACCTAC CGGATGCACG AGGTGTCGAG
TCCCCGACGT TCGTGATCGA GAAACAGCAA ACAGGTCCGC CCGGCCTCTT CGAGACGTTC
TCACGGGTCT TCGAGTCGAT GTGGGCACGA AGCAAGGAGA TCACCACGTG A
 
Protein sequence
MADKPIALKV LLRQKHLQGH RAFCKEYDKL AEQIEPELVG SWPSRAQFYR WLARDLQGLP 
YAHHCRILEA MFPGWTAEQL FQEHTGDIIL GSGALPTARD NVVHSPKPVM PSSQGMADVT
AVFPSRSTFS HELPPHKLFD GAKRIGMVGL SLNLLCQNYP DRFLLDLLES GTVVQCLFLD
PSGRYIKERE REESHLEGVL STLTRLNIQT LQRLHDKLSS GARENLRIRT YDEAVRFNIT
VIDDATCVVQ PYLPDARGVE SPTFVIEKQQ TGPPGLFETF SRVFESMWAR SKEITT