Gene Svir_30080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_30080 
Symbol 
ID8388332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3253534 
End bp3253965 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content71% 
IMG OID644977039 
Productpredicted CoA-binding protein 
Protein accessionYP_003134812 
Protein GI257056980 
COG category[R] General function prediction only 
COG ID[COG1832] Predicted CoA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.130624 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCACA CGGCCGAACG CGTACTCCGG GATTTCGACA CCATCGCGGT GGTGGGGCTC 
AGCCGTGACC CCGCCAAGGC GGCACACGCG GTGCCCGCCG CGTTGCAGAG CGCCGGTTTC
CGGATCATCC CGATCAACCC GGTCGTCGGG CCCGGCAGCG TCCTGCTCGG CGAGGCCGTG
TACCGCGGGC TTGCCGAGGC GGTCGAGGCA GGGGAGACGG TCGAGGTCGT GAACGTGTTC
CGACCCCCCG CTGAGGCGGC TTCGGTCGCG CGGGAGGCCG TGCGGGTCGG GGCGCGTGCT
CTGTGGCTGC AACAGGACAT CGTCTCGGCC GAGGCCCGTG CGATCGCCGA GGAGGCCGGA
CTGCTCTACG TGGAGGACGA GTGCATGGCC GTCGTCCGGG CGCAGTACGG GATCGTGAAG
CACGGCGCGT GA
 
Protein sequence
MTHTAERVLR DFDTIAVVGL SRDPAKAAHA VPAALQSAGF RIIPINPVVG PGSVLLGEAV 
YRGLAEAVEA GETVEVVNVF RPPAEAASVA REAVRVGARA LWLQQDIVSA EARAIAEEAG
LLYVEDECMA VVRAQYGIVK HGA