| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_30060 |
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| Symbol | |
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| ID | 8388330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3250302 |
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| End bp | 3251825 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644977037 |
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| Product | flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase |
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| Protein accession | YP_003134810 |
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| Protein GI | 257056978 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR03560] probable F420-dependent oxidoreductase, Rv1855c family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.15798 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCTTGC GCGACTACGG ACACGAACCG CGGTTCGGTA CGTTCCTCAC CCCCAGCGCG
TCCCAGCCGG AACAGACCGT GCGCCTCGCA CAAGTCAGTG AGCAGTCCGG ACTGGACCTC
GTCACGTTCC AGGACCACCC GTATCAGCCC GCGTTCCTGG ATACGTGGAC GTTGCTGTCG
TTCGTCGCCG CCCGAACCCA GCGGATCCTG CTCGCCCCCA ACGTCACCAA TCTGCCGCTG
CGCCCTCCCG CCGTGTTGGC GCGCGCCGCG GCCAGTCTCG ACCTCCTCAG CGACGGCCGC
GTGGAGCTGG GGCTCGGCGC GGGAGCGTTC TGGCAGGCCA TCGAGGCCAT GGGAAGCCCC
CGGCTCACCC CCGCGCAATC AGTACAGGCC CTGCAGGAAG CGATACGGAT CATCCGCGAA
CTGTGGGACA CGTCCCAACG CGGCGGGGTC CGCGTCGACG GTGAACGGTA CCGCGTCATC
GGCGCGAAAC GCGGCCCCGC GCCCGCCCAC CGCATCCCCA TCGTGCTCGG TGCCTACAAA
CCCCGGATGC TGCGACTGGT CGGAACGGAC GCCGACGGCT GGCTACCCAC ACTCGGCTAT
CTCCCCGGCA AGGAAGCGTT GGCCGAATCG AACGACATCA TCGACGAGGC CGCCGCCACC
GCCGGACGCG AACCGTCCGA GATCAGCCGG TGGCTCAACG TCGGCATCGA TGACATCGAC
CCGTCGTCCC TGGCCGAACT CGCGCTGGAA TACGGCATCT CGACGTTCGT CCTCGGCACC
GACGATCCCC ACACCATCGC CCGATTCGGA CAGGAGGTCG CCCCGGCGGT ACGCGAACTC
GTCGCGGCCG AACGGACCCC ACCGGCCGCC TCCGCCACAG CGGCCCACAC CGAGACGACG
GACACGGCCC GAACGGAGCT CGGGATATCC CCCACACCGG ACGACGGCAC ACGACTCAGT
CCGAGATTGC CGTGGGACGA AAGCACCCGC CCGACCGCAC CGCCCGCTCC ACAGGGGTAC
GAGTACACCC CTCGCGGTCG CGCCGTGAGT CGACACCTGG TGGACGTCCA CGACCACCTG
CGGTCCGAAC TCCGACAACT GCGCGATCCC ATGGCTCAGG TGAAGCAGGG CACACTCGGC
ATCGGCGCCG CCCGCTCACA GCTCAACCGG ATGACCCTGC GACAGAACAA CTGGACCCTC
GGCACCTACT GCGAGGCGTA CTGCCGCGTG GTCACCCAAC ACCACACCCT GGAGGACGAA
GGTATCTTCG CCCACCTCAG GTCCGTCGAC AGTGGCCTCG CCCCGGTACT CGATCGGCTC
GAGGAGGAGC ACCGTGTCAT CCACGACGTC CTCGAAGGCG TCGACCGCGC ACTCGTCCGG
CTCGCCGCGA ATCCCGACGA CCACACCGAA CTCGAACGCG CCGTCGACCT GCTGACCGAC
ACGCTGCTGT CGCATTTCGC CTACGAGGAA CGGGAGTTAC TGGAACCGCT GGCCAGGTAC
GGCATGTACG AAGGGCAACT CTGA
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| Protein sequence | MTLRDYGHEP RFGTFLTPSA SQPEQTVRLA QVSEQSGLDL VTFQDHPYQP AFLDTWTLLS
FVAARTQRIL LAPNVTNLPL RPPAVLARAA ASLDLLSDGR VELGLGAGAF WQAIEAMGSP
RLTPAQSVQA LQEAIRIIRE LWDTSQRGGV RVDGERYRVI GAKRGPAPAH RIPIVLGAYK
PRMLRLVGTD ADGWLPTLGY LPGKEALAES NDIIDEAAAT AGREPSEISR WLNVGIDDID
PSSLAELALE YGISTFVLGT DDPHTIARFG QEVAPAVREL VAAERTPPAA SATAAHTETT
DTARTELGIS PTPDDGTRLS PRLPWDESTR PTAPPAPQGY EYTPRGRAVS RHLVDVHDHL
RSELRQLRDP MAQVKQGTLG IGAARSQLNR MTLRQNNWTL GTYCEAYCRV VTQHHTLEDE
GIFAHLRSVD SGLAPVLDRL EEEHRVIHDV LEGVDRALVR LAANPDDHTE LERAVDLLTD
TLLSHFAYEE RELLEPLARY GMYEGQL
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