| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_29960 |
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| Symbol | |
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| ID | 8388320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3238469 |
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| End bp | 3239776 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644977027 |
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| Product | homoserine dehydrogenase |
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| Protein accession | YP_003134801 |
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| Protein GI | 257056969 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0460] Homoserine dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.316123 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGAGC GTCGCGAAAG TCCTGTTCGG GTCGCGCTGC TGGGGTGTGG CACGGTCGGC
AGTGAGGTTG CCCGCCTGCT GTTGAACGGC GCCGACGAGT TGGCGGCCCG GGTGGGTGCC
CCCGTCGAGT TGGCCGGCAT CGCGGTGCGC AGGCCCGACA AGCATCCGGA ACTGCCGCAG
CAGCTGTTGA CGGCCGACGC GGGTGAACTC GTCGAGTCCG ATGTGGACAT CGTCGTCGAG
TTGATCGGCG GTATCGAGCC GGTGCGCGGG TGGCTGCTCA CGGCGTTGCG CCAGGGCAAG
TCCGTGGTGA CGGGCAACAA GGCCCTGTTG GCCGAGCACG GTGGGGAGCT GTCGGAGGCC
GCCAACGACT CGGGCGCCGA CCTGTATTAC GAGGCGTCGG TCGCGGGTGC GATCCCACTG
TTGCGGCCGC TGCGGGAATC CCTGGCGGGG GACCGGATCA CCCGCGTGAT GGGCATCGTG
AACGGCACCA CGAACTTCAT CCTGTCCGCC ATGGACTCCA CGGGCGCCAG CTACGCCGAG
ACGTTGGAGG AGGCGACCCG GCTCGGCTAC GCGGAGGCCG ACCCGAGCGC GGACGTCGAG
GGCTACGACG CCGCGTCGAA GGCCGCGATC CTGGCGTCGT TGGCGTTCCA CACGCGGGTG
ACGGCGTCCG ACGTGTACCG CGAGGGCATC GTGGGCATCA CCGCCTCCGA CATCGCCGCG
GCCAAGCGGT TGAACCGGAC GGTGAAGCTG CTGGCGATCT GTGAACGGGT GACGGACGAG
GACGGCACCG AGTCGGTGTC GGCACGGGTG CACCCGGTGA TGATCCCCAG GACGCACCAA
CTCGCGGGAG TGGGTGGTGC GTTCAACGCG GTGTACGTCG AGGCCGAGGC CGCCGGCGAG
CTGATGTTCT ACGGTCAGGG CGCCGGAGGT GCCCCTACGG CGAGCGCGGT GCTCGGAGAC
CTGGTCGCGG CGGCCCGCAA CCGGGTCGCC GGCGGGCGTG GTCCCCGGGA GTCCGCGCAC
GCGGCGCTGC CGGTGCGGCC GATGGGGCAG ACCCCGACGC GTTACCACAT CAGCCTCGAC
GTGGCCGATC GTCCGGGTGT GCTGGCGCAG GTCGCCCAGG TGTTCGCTGC GCACGGGGTG
AGTATCGCCG CGGTGCGGCA GCGGGATGAG CGTTCCACGG CGAGGCTTGT GGTGGTCACC
CACTTGGCGC CGGACGCGGC GCTGGAGGCC ACGGTCAACG AGATCAGCAA GCTCGACGTG
GTGCGGGAAG TGCTGAGTGT GATGCGGGTG GAAGGCGAGG ATTCGTGA
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| Protein sequence | MSERRESPVR VALLGCGTVG SEVARLLLNG ADELAARVGA PVELAGIAVR RPDKHPELPQ
QLLTADAGEL VESDVDIVVE LIGGIEPVRG WLLTALRQGK SVVTGNKALL AEHGGELSEA
ANDSGADLYY EASVAGAIPL LRPLRESLAG DRITRVMGIV NGTTNFILSA MDSTGASYAE
TLEEATRLGY AEADPSADVE GYDAASKAAI LASLAFHTRV TASDVYREGI VGITASDIAA
AKRLNRTVKL LAICERVTDE DGTESVSARV HPVMIPRTHQ LAGVGGAFNA VYVEAEAAGE
LMFYGQGAGG APTASAVLGD LVAAARNRVA GGRGPRESAH AALPVRPMGQ TPTRYHISLD
VADRPGVLAQ VAQVFAAHGV SIAAVRQRDE RSTARLVVVT HLAPDAALEA TVNEISKLDV
VREVLSVMRV EGEDS
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