| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_29900 |
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| Symbol | |
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| ID | 8388314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3229613 |
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| End bp | 3232180 |
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| Gene Length | 2568 bp |
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| Protein Length | 855 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644977021 |
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| Product | transcriptional regulator, luxR family |
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| Protein accession | YP_003134795 |
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| Protein GI | 257056963 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.500705 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGTTGC TCTCCGACTG TCTGGAGGGC GGGGGCGGAC TCGCTGTGGT CACCGGTGGG
CTCGGAAGCG GCAAGACCGA ACTGCTGCGG CAGTGTGCCG ATCGTGCCGT CGAGGCGGGG
GCGCTGGTGT TGTCGGCCAG CGCGGTGTGG AGTGAGCAGT CGCTGGCCGG GGGAGTCTTG
GAGCAACTCG CGCAGAGTGC GCGTCCCCAG CCTGAGCTCG CCCACCGCAT GGGCGAGCTG
ATCGCGTCCT GTGCGACGCT GCGGCCCGAC CATCCGCGCA GCGCCCGCCT GCTCCACCAA
CTGTGCACGA CGGTGCTGGA GTTGTCCCAG CGGCACCCGG TCGTGGTGAG CATCGACGAC
GTGCAGTTCG CCGACAGCGT CTCACGACAG TTCCTGTTGC AGCTTCGACG GCGGATCTTC
CTGTCCCGGG TCCTGCTGTT GTTGAGTGAG TGGGAGCATT CCCATTCGCT GCCGTTACGG
CAGCATGCGG AGGGCAACGA GCGGCAGGCC TGTCACATTC GATTGGGGCC ACTCGGTGAA
GCGCAGATCA AGGCGATGCT GACGGAGCAT GTGGGTCGTG CGACGGCCGC CAAGCTCGCA
CCGTTGTGGA GCCGGTGGAG CGGTGGCAAC CGCATGCTCG TGCGGTCGAT GATCGACGAT
CTGGTCGCGG GTGAGGCCGC GGACGAGTGG CGACTCGGCC CCACCGCCGC CGGTTCCGTG
CTCGCTGCCC TGCATCGTTG GGAACCGTCG ATCCCGGCGG TGGTCCGAGC CATGGCGGTG
CTCGGGGACG GCCATCCGGT GGACTTCGTG GCGCGGCTGG TGGAGGTCAG CACCGAGGTC
GCTCAGCAGC TCGTCGGCTT TCTGGACACG TCCGGTCTGG TGTTGGGCGG CAGTTTCCGA
CATCCCGGTG TGCGTGCCGC GGTGTTGGAG AGCCTCTCCA CCACCGAGCG AGCCGCACTG
CACGGACGGG CGGCCGAGGT GTTGTACCGG TGTGGGGAGG ACGCCACGAC CGTTGCCACC
CACCTGCTGG CGCACGGTCG ACTCGACGAC GAACAGGCCC GTTGGGCGGT CGACGTGCTG
CGTGTCGCGG CCGAGCAGGC GCTGGCGGCG GACGACGTCG ACGCCGCGAT CCGGTACCTG
GAACTGGCCC TCCCCGCCGC CGAGGGACCG CAACGCCTCG AGGTCAATCG AGTGTTGGTC
CGGGCGTGGT GGCGGATCAA CCCGGCGGCA TCGGCCGTGC ACCTGGAGCC GTTGCACGCG
GCGATGTCGA CAGGGGAACT CGCCGGCCGG GACGTGGTGA TCCTGCTCTG GCACGCCCTG
TGGACGGGGG ACCACGACAC GGTCGCCGAG GTGTTGCGGC TGTGTCGGGA GAACCCGGAC
GTGCTCGACG TCCAATCCGC GGCGGAACTG AGGATCGTCT GTCAGTTCCA CGGCGTGGAC
CTCGAACCCG TCGAAGTCGG GGCGGCGCAG TCGGTGGTCG ATCCGTGGGC CGAGGCCGCC
CACGCGCTCG GACAGTTCTG GACCACGCGG TTCGACCGCC GGGCGGTGGC CGCGGCCGAA
CACGTCCTCA AAAGCAGTCG CCCCGGTGAG ACGGCGCCGG AGATGGTCGC CACCGCGTTG
TTGGTCCTGA CCTTCGCGGG CGACGCCGGG AGCGCCGAGC ATTGGTGCGG TCGCGTCATC
GACGAGGCCG TCAACGGCCG GGTACGCACG TGGCAGGCGT TCTTCGAGGT CGTACGGGCA
CATCTGACGT TGCGCCGGGG TGATCCCGCG ACGGCGTTTC GGCTGGCGTC CTCGGCGTTG
GATCTCCTGC CGACCCAGGG GTGGGGGGTG TCGATCGGTT ACCCCGCCGC CGTCCTGTTC
ACCGCGCTCA CGGAGTTGGG TGACCGGCAT CGGCTGGAGG AGCTGCTGCG GCTGCCGGTG
CCCAAGGCGA TGTTCGACAC CATCGTCGGT CTTTTCTATC TGCACGCACG AGGCCACGCC
CATCTGGCGT GTGGCCGCGC GCTCGCGGCC ATCAGCGATT TCCAGCAGTG CGGTCTGCTG
ATGGAAAGAT GGGGGGCGGA CCTGCCGTTG GTGGCGCCGT GGCGGCTCGA CCTCGCGGAG
GCCAACATCG CCCTCGGTCG ACGGGACGCC GCGCGGGACC TCGTCACCGA ACAGCTCACA
CGTCCTGGAA TCGGTCGTTG GACCCGGGGC ATCGCGATGC GTGTGCTGGC CGAGCTGAGC
GAGGCGGACG AGCGTGTGTC GTTGCTGCGG AAGTCGCTGG AACTGCTGAA GTCCTGCGGT
GACGGCCTGG CATTGGCGAG GACGCAGCGC CGCCTCGACG AGGCACGAGG CGGCGCAACG
GACGACGGGC CCGCACGAAG ACCCGGGAGG GGGTCCGTGG CGGTGTTGAG TGATTCCGAG
CGCCGGGTCG CCGAACTGGC GGCCACCGGC CATACCAACC GTGAGATCAG CGCACTGCTC
TACATCACGG TGAGCACGGT CGAACAGCAC CTCACCCGGG TGTACCGGAA GTTGGGGGTG
AAGGGCCGTG CCGAACTCCC ACGGGATTTG GCGCCGTTGG GCATTTAG
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| Protein sequence | MGLLSDCLEG GGGLAVVTGG LGSGKTELLR QCADRAVEAG ALVLSASAVW SEQSLAGGVL
EQLAQSARPQ PELAHRMGEL IASCATLRPD HPRSARLLHQ LCTTVLELSQ RHPVVVSIDD
VQFADSVSRQ FLLQLRRRIF LSRVLLLLSE WEHSHSLPLR QHAEGNERQA CHIRLGPLGE
AQIKAMLTEH VGRATAAKLA PLWSRWSGGN RMLVRSMIDD LVAGEAADEW RLGPTAAGSV
LAALHRWEPS IPAVVRAMAV LGDGHPVDFV ARLVEVSTEV AQQLVGFLDT SGLVLGGSFR
HPGVRAAVLE SLSTTERAAL HGRAAEVLYR CGEDATTVAT HLLAHGRLDD EQARWAVDVL
RVAAEQALAA DDVDAAIRYL ELALPAAEGP QRLEVNRVLV RAWWRINPAA SAVHLEPLHA
AMSTGELAGR DVVILLWHAL WTGDHDTVAE VLRLCRENPD VLDVQSAAEL RIVCQFHGVD
LEPVEVGAAQ SVVDPWAEAA HALGQFWTTR FDRRAVAAAE HVLKSSRPGE TAPEMVATAL
LVLTFAGDAG SAEHWCGRVI DEAVNGRVRT WQAFFEVVRA HLTLRRGDPA TAFRLASSAL
DLLPTQGWGV SIGYPAAVLF TALTELGDRH RLEELLRLPV PKAMFDTIVG LFYLHARGHA
HLACGRALAA ISDFQQCGLL MERWGADLPL VAPWRLDLAE ANIALGRRDA ARDLVTEQLT
RPGIGRWTRG IAMRVLAELS EADERVSLLR KSLELLKSCG DGLALARTQR RLDEARGGAT
DDGPARRPGR GSVAVLSDSE RRVAELAATG HTNREISALL YITVSTVEQH LTRVYRKLGV
KGRAELPRDL APLGI
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