Gene Svir_29590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_29590 
Symbol 
ID8388283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3198737 
End bp3199285 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content64% 
IMG OID644976990 
ProductATP synthase F0 subcomplex B subunit 
Protein accessionYP_003134764 
Protein GI257056932 
COG category[C] Energy production and conversion 
COG ID[COG0711] F0F1-type ATP synthase, subunit b 
TIGRFAM ID[TIGR01144] ATP synthase, F0 subunit b 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCTGG CGCAGGAAGA GTACAACCCT GTTCTTCCGC ACACCTCCGA GATCATCATC 
GGTCTTATCG CTTTCCTCCT CCTGCTGTTC GTCATGACGA AGTTCGTCAA GCCGCGCTTC
GAGAAGGTGT ACGAAGAGCG GGCAGCCAAG ATCGAGGGCG GTATCGAGAA GGCCGAGAAG
GCTCAGGCGG AGGCCGAGCA GGCGTTGGCG CAGTACAAGG CGCAGCTTGC GGAAGCTCGC
AGTGAGGCCG CCAAGATCCG TGACGATGCA CGGGCCGAGG CCGAACAGAT CAAGGAAGAA
CTGCGGGCAC AGGCCGAAGA GGAGGCCCGG CGCATCGTCG CCCAGGGCGA GGCGCAGTTG
CAGGCTCAGC GGGCCCAACT CATAGCCGAG CTTCGAGAGG ATCTCGGACG TAACGCCGTC
CTGCTGGCGG GGCGGATCGT TGGTGAGTCG CTCGAGGACG AGGCACGGCG CCGGGGTACC
GTCGACCGGT TCCTGGACGA GCTCGAGGCC AGTAGCTCTG TCAACGGCGC GGCCGGAGCA
AGGAAGTAG
 
Protein sequence
MILAQEEYNP VLPHTSEIII GLIAFLLLLF VMTKFVKPRF EKVYEERAAK IEGGIEKAEK 
AQAEAEQALA QYKAQLAEAR SEAAKIRDDA RAEAEQIKEE LRAQAEEEAR RIVAQGEAQL
QAQRAQLIAE LREDLGRNAV LLAGRIVGES LEDEARRRGT VDRFLDELEA SSSVNGAAGA
RK