| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_29460 |
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| Symbol | |
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| ID | 8388270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3186595 |
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| End bp | 3187359 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644976977 |
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| Product | amino acid ABC transporter ATP-binding protein |
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| Protein accession | YP_003134751 |
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| Protein GI | 257056919 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | [TIGR03005] ectoine/hydroxyectoine ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGCT TCGACCGGGT GGTCAAGAGA TTCGGTGACA ATGTCGTTCT GCGCGACCTC
AGTTTCAGCA CCGAAGCAGG CGAGTTCGTC ACCCTCATCG GGCCCAGTGG ATCGGGTAAG
ACAACCATTT TACGGCTGCT GATGACCCTG GAACGGGTCA ACGGGGGCAT GATCGAGGTC
GGTGGCGAAC CGCTGAGCCA CATGAAGAAG AACGGCAAGC TCGTTCCCGC CGACGAGAAA
CACCTGCGCA AGGTGCGACG CCGTATCGGA ATGGTGTTCC AGCAGTTCAA CCTGTTCCCG
AACATGAAGG TGTTGCAGAA CATCACCGAG GCCCCGATGC GGGTCCTGGG CAAGTCCCGG
GACGAAGCCG AGGACAAGGC GAGGTCACTG CTGGAGATGG TCGGCCTGAC CGACAAGGTC
GACGCTCACC CGTCGCAGCT GTCCGGGGGG CAGCAGCAGC GTGTGGCCAT CGCGCGGGCG
TTGGCGATGG AACCCGACGT GTTGCTGTTG GACGAGGTGA CCTCGGCGCT CGACCCGGAA
CTCGTGGCTG GGGTGTTGGG TGTGCTGCGG GAGATCGCGA GCACCACCGA CATCACGTTC
CTGTGCGTGA CCCACGAGAT GCAGTTCGCC CGCGACGTGT CGGACCGGGT GATGATGTTC
GACTCGGGGC GGATCATCGA GGACGGTCAT CCGGAGAAGC TGTTCACCGA TCCCTCCCAC
GCCAGGACCA GGGAATTCCT GCAAGCGGTG CTCGATCGGG CGTGA
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| Protein sequence | MIRFDRVVKR FGDNVVLRDL SFSTEAGEFV TLIGPSGSGK TTILRLLMTL ERVNGGMIEV
GGEPLSHMKK NGKLVPADEK HLRKVRRRIG MVFQQFNLFP NMKVLQNITE APMRVLGKSR
DEAEDKARSL LEMVGLTDKV DAHPSQLSGG QQQRVAIARA LAMEPDVLLL DEVTSALDPE
LVAGVLGVLR EIASTTDITF LCVTHEMQFA RDVSDRVMMF DSGRIIEDGH PEKLFTDPSH
ARTREFLQAV LDRA
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