Gene Svir_29400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_29400 
Symbol 
ID8388264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3181983 
End bp3182633 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content65% 
IMG OID644976971 
Producthypothetical protein 
Protein accessionYP_003134745 
Protein GI257056913 
COG category[L] Replication, recombination and repair 
COG ID[COG1637] Predicted nuclease of the RecB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGCTC GGTGCCAGGT GGACTACGCG GGCCGGTTGA CGGCTCATCT GCCCATGGCC 
ACGCGTTTGT TGCTTGTCAA GGCCGACGGC TCGGTGTCGG TCCATTCCGA CGACCGCGCT
TACAAGCCGT TGAACTGGAT GAGTCCGCCG TGCTGGCTGA TCGAGGACGG CAATCTCTGG
ATCGTGGAGA ACAAGGCGGG CGAGAAACTC GTCATCACGA TCGAGCAGAT CATCGACGAG
ATCGAGCACG ACCTCGGAGC TGAGCCCGGC CTGGTGAAGG ACGGTGTGGA GGCGCATCTG
CAGGAATTGC TCGCCGAGCA CATCACCACG CTCGGGGACG GCTACACCCT GGTGCGTCGC
GAGTATCCGA CCGCCATCGG CCCGGTGGAC ATCCTGGCGC GGGACGCCGA GGGGGGGACC
GTCGCCGTGG AGATCAAGCG ACGCGGTGAG ATCGACGGCG TGGAGCAGCT GACGCGGTAT
CTGGAACTGC TGAACCGCGA TCCGCTGTTG GCGCCCGTGC GAGGGGTGTT CGCCGCGCAG
CAGATCCGGC CCCAGGCCCG GACGTTGGCC GAGGACCGGG GGATTCGCTG CGTGACCCTG
GACTACGACA AGCTCCGCGG TATCGAGAGC AACGACCTCA CGTTGTTCTG A
 
Protein sequence
MIARCQVDYA GRLTAHLPMA TRLLLVKADG SVSVHSDDRA YKPLNWMSPP CWLIEDGNLW 
IVENKAGEKL VITIEQIIDE IEHDLGAEPG LVKDGVEAHL QELLAEHITT LGDGYTLVRR
EYPTAIGPVD ILARDAEGGT VAVEIKRRGE IDGVEQLTRY LELLNRDPLL APVRGVFAAQ
QIRPQARTLA EDRGIRCVTL DYDKLRGIES NDLTLF