| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_28870 |
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| Symbol | |
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| ID | 8388211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3134619 |
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| End bp | 3135827 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644976918 |
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| Product | arabinose efflux permease family protein |
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| Protein accession | YP_003134693 |
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| Protein GI | 257056861 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.447315 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAGT TGGTAACTAC CACGACAGCG CCCCGGATGA GCGACGCTCT CCGCAACCGG
GAGTTCCGTG CCCTGTGGTT CGCGGAGGCC CAATCAGTCC TCGGCGACCA TCTGACGACG
GTGGCGTTGT CCATCGTGGT GTACGGCCGC ACGGGTTCGG CGTTATGGGC AGCCGTGGTG
TACGCGCTGA CCTTCCTGCC CGCTCTCGCG GGTGGTCTCG GACTCTCCCA GATCGCCGAC
AGACGGCCCC GGAAAACCGT GCTCGTCGTG TCCTTCGTCA TGCAGGCGGT GTTCGTGGGG
ACCATGGCGA TCCCCGGAAC ACCGCTGGCC GTGCTGGTCA CGCTGGTCGT GTTGGCCCGG
CTGGCCGGAG CACCGGCCAA CGCGGCACAA AACGCGTTGA CCAGGGAGGT CTTCGCCGAC
GACGAGCTGT ACCTGCGCAG TCAGGACCTG CGGGGTATCA CCACCAACAT CGGCATGCTC
ATCGGTCTCG GCGGCGGGGG GTTGCTGGTC ACGTCGCTCG GCCCCTCGTG GGCGCTGGCC
CTTGACGCCC TGACCTTCCT CGTGGCCGCG GCGCTCGTGC AATTCTCGGT GCGACAGCGT
CCCGTTCCCG GCGACCCTGG CGACGGTTGG TTCAGCGCCG TGCGATGGGT ATGGGGACAA
CGCCGCTTAC GAGTGTTGCT GGCGCTGTCC TGGTTGGTGG GCCTCGCGGT GATCCCCGAA
GGGCTCGCCG CTCCACTCGC CCACCAGATC GGCGCCTCAG AACAGGCCGT GGGGTGGTTG
TTGGCCGCTG ATCCCGTGGG CTTCATCCTC GGGACGTTCG TGCTTTCCCG GTTCGTCTCA
GCCCAGAACC GCAAGCGCAT CATGGGCGTG CTGGCCACAC TGGCCGCAGC GGTCCTCATC
GGTTTCGCAG CGACCCCCAC TCTGCCCTTC GCTCTGTTGC TGTTGATGCT CGCTGGCGCC
GCGGGTGCCT ACATCATCAC CGTGGGCGCC ACCTTCATCA CGTGGGTCCC CAACGAGTTA
CGCGGAGGCG CGGGCGGCGT CTACCGCACC GGCCTCCGCG TCGCACAGGG TTTGGGTGTC
GCACTCGGCG GCGTGATCGC GGATCTCGTC GGATCCGCGA CGTTCACGAT CGCCCTCGCC
GGAATGGCGG GTGTCGTACT CACGATCCCG GTCGCCGTGT CCTGGGCGCG CATCCTGAAG
ACCCAGTGA
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| Protein sequence | MTKLVTTTTA PRMSDALRNR EFRALWFAEA QSVLGDHLTT VALSIVVYGR TGSALWAAVV
YALTFLPALA GGLGLSQIAD RRPRKTVLVV SFVMQAVFVG TMAIPGTPLA VLVTLVVLAR
LAGAPANAAQ NALTREVFAD DELYLRSQDL RGITTNIGML IGLGGGGLLV TSLGPSWALA
LDALTFLVAA ALVQFSVRQR PVPGDPGDGW FSAVRWVWGQ RRLRVLLALS WLVGLAVIPE
GLAAPLAHQI GASEQAVGWL LAADPVGFIL GTFVLSRFVS AQNRKRIMGV LATLAAAVLI
GFAATPTLPF ALLLLMLAGA AGAYIITVGA TFITWVPNEL RGGAGGVYRT GLRVAQGLGV
ALGGVIADLV GSATFTIALA GMAGVVLTIP VAVSWARILK TQ
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