| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_28710 |
|---|
| Symbol | |
|---|
| ID | 8388195 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 3116567 |
|---|
| End bp | 3117490 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644976902 |
|---|
| Product | sugar phosphate isomerase/epimerase |
|---|
| Protein accession | YP_003134678 |
|---|
| Protein GI | 257056846 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0885144 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0589318 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCACCG CTGAGCAGTG GCCCATCGCC TGCAACATGC TGCCCTTCGG CAACGTCGCT
CCCGATGGGT CCCACATCAA AGACGCCCCC GCCACCGTGT GGGCGAGCCA GATGCGCCAG
GTGCGCGAGC TGGGCTTCGA CCACATCGAC CCGACCGACG CATGGGTGCC GCTGGGCAGC
ATGCCGGAGC ACAGGGTCAA GGAGTTCCAG CAGGTCCTGG CGGACGAAGG CCTCAAGGTC
TCGTCCATCT CCATGACCCG CAGCAGCATC GTGGACGTCA AACACGGCGA GGAGAACCTC
GCCGCCGCGC ACCGACTCAT CGATCTCGCA CCCGAATTCG GCGCGACGAT CGTCAACATC
GGCTTCATGC AGGCGCTGAC CGCCGAGCAG CAGAAACAGC TGTGGTTCTG GCTGGTGGAC
GGGCACAAGG ACGACCCGGA ACTGCGCCCG CTGGCCATCG AGCGCACCCG GGAACTCGGG
GAGCACGCGC AGCGCAACGG CATCCAGATC AGCCTGGAGA TGTACGAGGA CACCTACGTC
GGCACCCCCG ACGACGCGGT TTCCTTCGTC AAGGACGTCA ACCACCCCGC CGTCGGCCTC
AACCCCGACA TCGGCAACCT GATCAGGCTG CACCGGCCGA TGCCGCCCTA CATGGAGATG
TTCGAGAAAG TGCTGCCGTA CTCGAACTTC TGGCACATCA AGAACTACAT GCGTGACGAA
GACCCCAAGA CGGGCTCGTA CGCATCGGCG CCCATGCCCC TGAAGTACGG CGTCATCAAC
TACCGGGCCG TCATCCGGCG GGCTCTCGAA CTGGGTTACT CCGGTCCGTT CTGCTGCGAG
CACTACGGCA GTGACTCGCT CGGTGTGTGT GCCGAGAACC GCGATTACAT CCGGCAGGTT
CTGCGTTCCG CGCTGAGTGA GTGA
|
|---|
| Protein sequence | MFTAEQWPIA CNMLPFGNVA PDGSHIKDAP ATVWASQMRQ VRELGFDHID PTDAWVPLGS
MPEHRVKEFQ QVLADEGLKV SSISMTRSSI VDVKHGEENL AAAHRLIDLA PEFGATIVNI
GFMQALTAEQ QKQLWFWLVD GHKDDPELRP LAIERTRELG EHAQRNGIQI SLEMYEDTYV
GTPDDAVSFV KDVNHPAVGL NPDIGNLIRL HRPMPPYMEM FEKVLPYSNF WHIKNYMRDE
DPKTGSYASA PMPLKYGVIN YRAVIRRALE LGYSGPFCCE HYGSDSLGVC AENRDYIRQV
LRSALSE
|
|---|
| |