Gene Svir_28620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_28620 
Symbol 
ID8388186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3108107 
End bp3108871 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content68% 
IMG OID644976893 
Producthypothetical protein 
Protein accessionYP_003134670 
Protein GI257056838 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.710359 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.158691 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAGA ACGCCATTGT GTTACGGGCC TTCGATCTCG ACCTCGAACG TGCTTTCGAG 
CTCGATGTCG AAGCGGCCGG CACCATCGCG GGGGTCACCG GTCTCGTCGC GCTGGCGGTG
GTCGTCGTAG GGAGGCCATG GCGATTGGCC CGAAACGTGG TGACGATCGT GCACGAAGCC
GGGCACGCGT TGGTCGCCCT GCTGGCGGGC CGCCGGTTGC AGGGCATCAC CCTGCACTCC
GACACCTCCG GCGTCACCGT GTCGAAAGGT AAACCCACGG GGCCCGGCAT GGTGCTGACC
GCGCTCGCCG GTTACCCCGC GCCCGCCGTG CTCGGTCTCG TGTTCGCGGG GCTGGTCTCG
GCCGAACGGC TCAGCGCGGT ACTCGGCATC GCCGCCGTGT TGCTGTTGGG CGTGCTGGTG
ATGGTGCGCA ATGCCTACGG CGTGTTCTCG GTGTTGTTGT CCGCGTCGGT ACTCGGTGCG
GTCGCGCTGT TCGCCGGGCC GGGGGTGCAG GCGGCATTCG TCTACCTGAT GACATGGTTC
CTCCTGTTCG GCGCGGTGCG TCCCCTGTTC GAGCTCCAGG CCAAGCGGCG GAGGGGGGCG
GCCCGGGATT CGGACATCGA CCAATTGGCA CGCCTGACCG GGCTTCCCGC GCTGCTGTGG
CTGCTCGTGT TGGGAGCGCT CGCGGCGACA TGCGTGGTGG TCGGTGGGAT GTTGCTCACC
GAACCCGTGG TGGTACCGAG CGGGTTCACC GCGGCCACGG GCTGA
 
Protein sequence
MDENAIVLRA FDLDLERAFE LDVEAAGTIA GVTGLVALAV VVVGRPWRLA RNVVTIVHEA 
GHALVALLAG RRLQGITLHS DTSGVTVSKG KPTGPGMVLT ALAGYPAPAV LGLVFAGLVS
AERLSAVLGI AAVLLLGVLV MVRNAYGVFS VLLSASVLGA VALFAGPGVQ AAFVYLMTWF
LLFGAVRPLF ELQAKRRRGA ARDSDIDQLA RLTGLPALLW LLVLGALAAT CVVVGGMLLT
EPVVVPSGFT AATG