Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_28620 |
Symbol | |
ID | 8388186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3108107 |
End bp | 3108871 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644976893 |
Product | hypothetical protein |
Protein accession | YP_003134670 |
Protein GI | 257056838 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.710359 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.158691 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGAGA ACGCCATTGT GTTACGGGCC TTCGATCTCG ACCTCGAACG TGCTTTCGAG CTCGATGTCG AAGCGGCCGG CACCATCGCG GGGGTCACCG GTCTCGTCGC GCTGGCGGTG GTCGTCGTAG GGAGGCCATG GCGATTGGCC CGAAACGTGG TGACGATCGT GCACGAAGCC GGGCACGCGT TGGTCGCCCT GCTGGCGGGC CGCCGGTTGC AGGGCATCAC CCTGCACTCC GACACCTCCG GCGTCACCGT GTCGAAAGGT AAACCCACGG GGCCCGGCAT GGTGCTGACC GCGCTCGCCG GTTACCCCGC GCCCGCCGTG CTCGGTCTCG TGTTCGCGGG GCTGGTCTCG GCCGAACGGC TCAGCGCGGT ACTCGGCATC GCCGCCGTGT TGCTGTTGGG CGTGCTGGTG ATGGTGCGCA ATGCCTACGG CGTGTTCTCG GTGTTGTTGT CCGCGTCGGT ACTCGGTGCG GTCGCGCTGT TCGCCGGGCC GGGGGTGCAG GCGGCATTCG TCTACCTGAT GACATGGTTC CTCCTGTTCG GCGCGGTGCG TCCCCTGTTC GAGCTCCAGG CCAAGCGGCG GAGGGGGGCG GCCCGGGATT CGGACATCGA CCAATTGGCA CGCCTGACCG GGCTTCCCGC GCTGCTGTGG CTGCTCGTGT TGGGAGCGCT CGCGGCGACA TGCGTGGTGG TCGGTGGGAT GTTGCTCACC GAACCCGTGG TGGTACCGAG CGGGTTCACC GCGGCCACGG GCTGA
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Protein sequence | MDENAIVLRA FDLDLERAFE LDVEAAGTIA GVTGLVALAV VVVGRPWRLA RNVVTIVHEA GHALVALLAG RRLQGITLHS DTSGVTVSKG KPTGPGMVLT ALAGYPAPAV LGLVFAGLVS AERLSAVLGI AAVLLLGVLV MVRNAYGVFS VLLSASVLGA VALFAGPGVQ AAFVYLMTWF LLFGAVRPLF ELQAKRRRGA ARDSDIDQLA RLTGLPALLW LLVLGALAAT CVVVGGMLLT EPVVVPSGFT AATG
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