Gene Svir_28530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_28530 
Symbol 
ID8388177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3098199 
End bp3098573 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content69% 
IMG OID644976884 
Producthypothetical protein 
Protein accessionYP_003134661 
Protein GI257056829 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.158089 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCGAACA AGGCTGCTGT CTTGTTCCGT GTCGTGGCCA TCGCTGAAGC CTTCTCGTGG 
ATGGGGCTCC TGGTCGGCAT GTTCCTGAAA TATGTCGTGG AGCTCGGCGA GGGGGGCGTC
CCGGTACTGG GCGCTGTGCA CGGCGCACTG TTCGTCATCT ACGCCGTCAC GACACTCGCG
GTCGCACGTC CGCTCGGCTG GCGGTTCGGC ACCGTGCTGG CTGCCCTGCT CGCCGCCGTC
CCGCCGCTGT TCACCTGGTT GTTCGAAAGG TGGGCGCTGC GCCGCGGCAA GCTCGACGGC
CCCGAGCGGC TGCGCTACGG CGGCACCGCT CTGTTCGTGC GCCGTGACGA CGGCGACGCG
GTCGCCAGCG CGTGA
 
Protein sequence
MSNKAAVLFR VVAIAEAFSW MGLLVGMFLK YVVELGEGGV PVLGAVHGAL FVIYAVTTLA 
VARPLGWRFG TVLAALLAAV PPLFTWLFER WALRRGKLDG PERLRYGGTA LFVRRDDGDA
VASA