Gene Svir_28510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_28510 
Symbol 
ID8388175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3097280 
End bp3097585 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content67% 
IMG OID644976882 
Productconserved hypothetical protein TIGR00106 
Protein accessionYP_003134659 
Protein GI257056827 
COG category[S] Function unknown 
COG ID[COG0011] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00106] uncharacterized protein, MTH1187 family 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.105859 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCGTGG CGTTCAGCGT GAGTCCGTCG GGTGGGGAGG ACGGCAGCGT CAGCGAGGCC 
GTGGCCCGTG CCGTGCAGGT CGTTCGGGAG TCGGGACTGC CGAACGAGAC CAACGCGATG
TTCACCAACA TCGAGGGCGA GTGGGACGAG GTGATGGACG TCGTCAAGCG GGCCGTCGAG
GCGGCGGGTG AAGGGGCTGC TCGCGTGAGC CTGGTGCTCA AAGCCGACAT CCGCCCAGGG
CACGAGGGGC AGTTGGCGGC GAAGGTCGAG CGGGTGGAAC AACACCTGGC ACGAAACGAC
GGGTGA
 
Protein sequence
MIVAFSVSPS GGEDGSVSEA VARAVQVVRE SGLPNETNAM FTNIEGEWDE VMDVVKRAVE 
AAGEGAARVS LVLKADIRPG HEGQLAAKVE RVEQHLARND G