Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_28240 |
Symbol | |
ID | 8388148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3064251 |
End bp | 3064913 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644976855 |
Product | enoyl-CoA hydratase/carnithine racemase |
Protein accession | YP_003134632 |
Protein GI | 257056800 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACAT TGCACCGTCA GGAGTCCGTG TTCGTGCTCG AACTCGGCGA CGATGAGAAC CGCTTCTCCG TGGAGTGGTT GAAGTCCGTC CACTCCATAC TGGACACCGT CTGCGAACAC GATGGTCCCG CCGCGCTCGT CACCGTCGGA CGCGGCAAGT TCTACTCCAA CGGCCTCGAC CTGGAGTGGT TGCTGGCCAA CGGTGACCAG GCCGAGCGTT ACGTGACCGA CGTGCACGAG TTGTTCGCCC GGGTGCTCAC CCTGCCGGTA CCCACGGTGG CCGCCGTGAA CGGTCACGCG TTCGGTGCCG GTGCCATGCT GGCGATGGCG CACGACTTCC GGGTCATGCG TGCCGACCGC GGGTTCTTCT GCTTCCCCGA GGCCGACATC AACATCCCGT TCACACCGGG TATGGCCGCG CTCATCCAAA GCAAGCTCAC CCCGGCCGCG GCGGTCGCCT CGATGACCAC CGGCCGACGT TTCGGCGGGC ACGAGGCGGC CGAGATCGGT CTCGTGGACG CCGTCGCGGA GGAGGACGAA GTGCTGTCGA GCGCGTGCGA ACGGGTTCGC GCGCTGGCGG GCAAGGACCG GGGCACGCTC GCCGCCATCA AATCCACCAT GTTCGCCTCC GCCGTCGAGG CGCTGCGTTC GACGAAGTCT TAA
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Protein sequence | MPTLHRQESV FVLELGDDEN RFSVEWLKSV HSILDTVCEH DGPAALVTVG RGKFYSNGLD LEWLLANGDQ AERYVTDVHE LFARVLTLPV PTVAAVNGHA FGAGAMLAMA HDFRVMRADR GFFCFPEADI NIPFTPGMAA LIQSKLTPAA AVASMTTGRR FGGHEAAEIG LVDAVAEEDE VLSSACERVR ALAGKDRGTL AAIKSTMFAS AVEALRSTKS
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