| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_28220 |
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| Symbol | |
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| ID | 8388146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3061235 |
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| End bp | 3062887 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644976853 |
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| Product | uncharacterized vancomycin resistance protein |
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| Protein accession | YP_003134630 |
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| Protein GI | 257056798 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2720] Uncharacterized vancomycin resistance protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGGCT TCCTGGTCCT GTTGTACGGA CTCGACCTGC TCGTCACCCA CGGCAACATC
CCACGGGGGG TGAGCGTCGC CGGTGTCGAC GTGGGCGGCA TGAGCCACGC CAAGGCCGAG
GACCTGCTGC GGGAGGAGAT CGAACCACGG CTCGACCAGC CGGTGGCCTA CGTCGCGGGT
GAGGTGTCGG GTGAGTTCAA CCCGAAACAG GCCGGACTGG CGCTCGACTG GGATGCCACG
CTCGAACAGG CGGGTGACCA ACCCCTCAAC CCCTTCACCC GCATCGCCTC GTTCTTCACC
ACCACCGAGC TGGGCGTGGT GACCACGCCC GAGGAGAATC AGTTCGCCAA CGCCATGAAG
GCGTTGCGCA AGGAGATCAA CCAGGACCCC GTCGAGGGCG ACGTCGTCTT CGAGGGCGCA
CAGCCGAAGG CCGTGGAGCC CAAACAGGGC CAGGAGCTCA AGGAGGACCA GGCCCGCGAG
GTGATCCTCG CCCACTGGGT CTCCGGGGAA CAGCTCGAAC TGCCGGTGGA CTCGACGCCG
GTCACGGTGT CCATGGAAGA GGTGCAGAAG GCGCTCAAGC AGGTGGCCGA GCCCGCCATG
TCCGGCCCTG TGGTGATCCG CGGTGAGGGT GCCGACGGCG TGCTGGAGCC TGAGGAGATC
GCGGCCGGAC TGTCGTTCGA GGCCAAGGAC GGCTCCTTGG TCCCGAAGAT CGACCAGAAG
AAGATCATCG CCGGCGTCAA GGAGGAACTG GCCTCCACGG AGAAGGAGGG CAAGGACGCC
ACGATCGTCT TCAAGGACGG CAAGCCCACC GTCGAACCGT CCGAGGACGG CGTCAAGATC
CAGTGGGACG AGACGCTGAA GCCACTGCTC GACGTGCTCA AGAAGACCGA GGGCCGCGAG
CTGCAGGCGT CCTACAAGGA GGAGCCCGCC GAGCTCACCA CCGAGGAGGC CGAGGGTCTC
GGCATCAAGG AGGTCATCGG CGAGTTCACC ACCGGTGGGT TCGCCCCCGA CTCGGGTGTG
AACATCCGCG TGGTCGCCGA GAAGGTCAAC GGCGCGATCG TCAAGCCCGG CGAGACGTTC
AGTCTCAACG AGTTCACCGG TCCCCGCACC AAGGCGCAGG GTTACGTCGA GGCGGGCATC
ATCGAAAACG GCGCCCCGGG CAAGGCCGTC GGTGGGGGGA TCTCCCAGTT CGCCACGACG
TTGTACAACG CGTACTACTT CGCGGGCCTG AAGGACGCCG GACACAAGGA ACACAGCTAC
TACATCAGCC GGTACCCGAA GGGCCGCGAG GCCACCGTGT TCCAGAACCC CGACGGCTCC
AGCGTCATCG ACCTGAAATT CACCAATGAC AGCCCGCACG GCGTGGCGAT CCAGACGATC
TGGACCCCGT CGGACATCAC CGTGCGACTG TGGGGCACCA AGCGGTACGA GGTCAAATCG
GAGACCGGAC CTGAGACCGA CAAGGTGCCG CCGCCCGAGA AGGAAGGCCC GGCGGAGAAC
TGCCAGCCGA GTCCGGGCGC CCCGGGCTTC ACCGTGACCG ACACCCGGAT CATCACGGAC
ATCGAGACGG GGCAGGAAGT ACGCAGGGAA GAGCGCACGG TGAAGTACAA CCCGCAGCCG
AAGATCGTCT GCAAGGACAA GAGGGACGAC TGA
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| Protein sequence | MAGFLVLLYG LDLLVTHGNI PRGVSVAGVD VGGMSHAKAE DLLREEIEPR LDQPVAYVAG
EVSGEFNPKQ AGLALDWDAT LEQAGDQPLN PFTRIASFFT TTELGVVTTP EENQFANAMK
ALRKEINQDP VEGDVVFEGA QPKAVEPKQG QELKEDQARE VILAHWVSGE QLELPVDSTP
VTVSMEEVQK ALKQVAEPAM SGPVVIRGEG ADGVLEPEEI AAGLSFEAKD GSLVPKIDQK
KIIAGVKEEL ASTEKEGKDA TIVFKDGKPT VEPSEDGVKI QWDETLKPLL DVLKKTEGRE
LQASYKEEPA ELTTEEAEGL GIKEVIGEFT TGGFAPDSGV NIRVVAEKVN GAIVKPGETF
SLNEFTGPRT KAQGYVEAGI IENGAPGKAV GGGISQFATT LYNAYYFAGL KDAGHKEHSY
YISRYPKGRE ATVFQNPDGS SVIDLKFTND SPHGVAIQTI WTPSDITVRL WGTKRYEVKS
ETGPETDKVP PPEKEGPAEN CQPSPGAPGF TVTDTRIITD IETGQEVRRE ERTVKYNPQP
KIVCKDKRDD
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