| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_28210 |
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| Symbol | |
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| ID | 8388145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3059132 |
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| End bp | 3060316 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644976852 |
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| Product | arabinose efflux permease family protein |
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| Protein accession | YP_003134629 |
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| Protein GI | 257056797 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGGTT CCCATGCCGA TGTCGACAGC GAGGCGATCT CCCCCTTACG ACACCGGCCG
TTCGTGCTCA TGTTGCTCGC TTCGGCCGGT ACCTTCAGTG GCTTCTCCCT GCTGCTGCCC
GTCGTGCCGA TGTGGGCGGT GGAGCAGGAG GCGGGAGCGG TCGTCGCAGG GGCCGCCACC
GGCACCTTCA TGGCCAGCAC GGTGCTGGTG CAGTTCGTCG TCCCCGCGTT CGTGCGTTCG
TTCGGCTACC GTTCCGGCCT GATACTGGGC GCGGTGTTGA TCGGCCTTCC CGCGTCGTTG
CTGGCGGTGT TCCCCTCCGC GGCCGGGATC CTCGGATTGT CGTTCGTACG GGGGTTGGGA
TTCGGCTTCA TCACGGTCTG TGGCAGTGCC CTCATCGCCG AGTTGCTGCC CCAGGGCTCA
TTGGCGCGGG GTTCGGGGCT CTACGGACTC GCTGTGGGGA TGCCGCAGCT GGTGGGACTC
CCGTTCGGTT CCGCCGTCGC CGAGAACTGG GGGTTCGCGC CGGTCTTCGC GCTCGCCACG
GCGTTGCCGC TGCTCGCGAT CGGACCACTG TTGGGGCTGC CGCGCTCACG TCCGAAGGAG
GACACGGGAA GTACCGGGGT ACGCGCAGTC GCCGACCTGG TGATGGCCAC GTGGCGGCCG
TGGCTGCCGA TGTTCGCCAT GTCCGCGGGG TACGGTGCGC TGGCGTCCTT CCTGCCCATC
GTGCTCACCC CGTCCGTGGC GACGATCGCG CTGCTCGTGA TTCCCGGTAC CGCGATGCTC
ACCCGTTGGC TCGCGGGGCA TTTCGGGGAC CGCATCGCCG CGCCGGGTCG GTTGTTGCTG
CCCGCCCTCG CGGTCGGTGC GGTGGGGCTG TTGCTGTTCG CCCTCGTCTC GGAGAGTGAG
AGCTGGTTGG TCGCGGCGGT GGTGGCCGTC GCGGTGTTCG GTGTCGGGTT CGGGGTCGTG
CAAAACGATG CGCTGGTGAC GATGTTCGAC CGCGCTCCCG CCGCCCAGGC CAGCGTCTCG
TGGAACGTCG CCTACGACGC CGGGCAGGGG ATCGGCGCCG TCGCGGTGGG TGCGGTGATC
TCGGCTACCA CCGTCTGGGC CGGGTTCGGT CTGCTGGGGG TGGCGGCGCT CGTCATGTTG
CCCGCCGCCT GGAAGGCGGG CAAGAAGGGG AAGACGGACG GTTAG
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| Protein sequence | MPGSHADVDS EAISPLRHRP FVLMLLASAG TFSGFSLLLP VVPMWAVEQE AGAVVAGAAT
GTFMASTVLV QFVVPAFVRS FGYRSGLILG AVLIGLPASL LAVFPSAAGI LGLSFVRGLG
FGFITVCGSA LIAELLPQGS LARGSGLYGL AVGMPQLVGL PFGSAVAENW GFAPVFALAT
ALPLLAIGPL LGLPRSRPKE DTGSTGVRAV ADLVMATWRP WLPMFAMSAG YGALASFLPI
VLTPSVATIA LLVIPGTAML TRWLAGHFGD RIAAPGRLLL PALAVGAVGL LLFALVSESE
SWLVAAVVAV AVFGVGFGVV QNDALVTMFD RAPAAQASVS WNVAYDAGQG IGAVAVGAVI
SATTVWAGFG LLGVAALVML PAAWKAGKKG KTDG
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