| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_27930 |
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| Symbol | |
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| ID | 8388117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3024835 |
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| End bp | 3025920 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644976824 |
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| Product | geranylgeranyl pyrophosphate synthase |
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| Protein accession | YP_003134601 |
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| Protein GI | 257056769 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.496263 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0148812 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGTCT TCGACGCTGA CCTGCCGTCC GAGTTCGAGC GCGTACTGCG TGACTTCCTC
CATGATGCCG GTGAATCGAT TTGCCGCATC GAGCCGACGT TCGGCCCGGC CGTGTCCACC
TTGAGAGACT TCGTGCTCGG AGGCGGCAAA CGGTTACGGC CCACCTTCGC CTGGTGGGCG
TGGCGTGGCG CGGGCGGCAC CCCGGATTCG GACGAGGCCG AAGGGGTACT GCGAGCCGTG
GCCAGCCTGG AGTTGATCCA GGCGTGCGCA TTGATCCACG ACGACGTCAT CGACTCCTCC
GATTCCCGTC GTGGTTCGCC CACGGTGCAT GTCGCCTTCG CGGCTCGTCA CACCCGGGAA
CGCTGGCTCG GCTCGGCCGA GGCGTTCGGA CAGGCCGCCG CCGTCCTCAT CGGAGACCTG
GCGTTGGCCT GGGCCGAAGA CATGTTCGCC GAATGCGGGC TGCCTCCCGC GACGATCGCG
GCCGCCCGTC CCGCGTGGCG GGCCATGCGC ACCGAGGTTC TGGCCGGGCA GTACCTCGAC
GTCCACACCC AGGCCACCGG GGACACCTCC GTGGAGGCCG CGTTGCGGGT CGATCGGCTC
AAGACCGCCG CCTACACCGT GCAGCGTCCC CTTCACCTGG GTGCCGCGCT CGCCGGGGCC
GACGACGAAC TCATCGACGC GTTGCTGGAC TTCGGGGGTG AACTCGGGGT CGCCTTCCAA
CTTCGGGACG ACCTGCTCGG GGTGTTCGGG GACCCGTCCG TCACGGGCAA ACCCGCGGGG
GACGACCTGC GCGAGGGCAA ACGCACGCTG CTGGTGGCGC TCGGCCTGGA CTACGCCGAA
CGGCAAGGGT CCACCAAGGA ACGGAAGATG ATCGCCGAGG CGGTGGGTGA CCCCGATCTG
ACCGACGCGG AGGTGGACGA CGTCCGGCAG GCACTCGTCA GCGTCGGCGC GGTCGCCGAG
GTGGAACGCC GGATCGAGGC GATGACCGAG AACGCGCTGG CCGCGCTTCG CAAAGCCTCA
CTCGCCGAAC CCGCCGCCCA ACGGCTCGTC GAACTCGCGG ACCGAGCGAC CCGCAGGACC
TCCTGA
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| Protein sequence | MPVFDADLPS EFERVLRDFL HDAGESICRI EPTFGPAVST LRDFVLGGGK RLRPTFAWWA
WRGAGGTPDS DEAEGVLRAV ASLELIQACA LIHDDVIDSS DSRRGSPTVH VAFAARHTRE
RWLGSAEAFG QAAAVLIGDL ALAWAEDMFA ECGLPPATIA AARPAWRAMR TEVLAGQYLD
VHTQATGDTS VEAALRVDRL KTAAYTVQRP LHLGAALAGA DDELIDALLD FGGELGVAFQ
LRDDLLGVFG DPSVTGKPAG DDLREGKRTL LVALGLDYAE RQGSTKERKM IAEAVGDPDL
TDAEVDDVRQ ALVSVGAVAE VERRIEAMTE NALAALRKAS LAEPAAQRLV ELADRATRRT
S
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