| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_27900 |
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| Symbol | |
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| ID | 8388114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3020582 |
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| End bp | 3021517 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644976821 |
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| Product | membrane protein |
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| Protein accession | YP_003134598 |
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| Protein GI | 257056766 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0399576 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTCGA TCGGTACTTT CCGCCCGCGC GCGGCCTCCC TCAGCTTGAT CACCGCCGGG
GTGTTGTGGG GGACCGGGGG GCTCGCCGGA GCGGTGCTTT CGGAACGGGC CGGATTGTCC
TCGACCACGG TCGCGGTGTA CCGATTGCTG CTCGGCGGTG TCTTCGCTCT GCTCTTTCTG
GGCGGTACGG GACGGCTGCG CGCGTTGCCC CGTACCGCAG AGGCGGTGCG GCGGCTGCTC
GCGGCGGGGA CGTTGCTGGC CGTCTTCCAG GCGTGCTACT TCGGTGCGGT GGCGCTGACC
TCGGTCGGGG TCGCCACCAT GGTCACCATC GGTAGTGTCC CCGTCTTCGT CGCCCTCGCG
AGCACGGTGC TCGACCGACG TGCCCCCGGG CTGTCCACGG CGGTGTCCGT GGGATGCGCG
GTGTCGGGGC TGGTCCTGCT GAGCTGGCCG TCCGGTGATG CCGGTGTGGC CGGCGCGGCT
TCCGGAGTCG GGGGTCTGCT CGGCGGACTG GCGTGCGCTC TCGCCTCCGG TGCGAGTTTC
GCGACGTTGA CGTTGGTGAC CCGCAGCCCA GTGGAGGGAT TGGATTCCCT GCGGACGACG
GCGTTCGGCT GTCTTGTGGG TGGGGTGTTG CTGGCGCCGG TGGCGGCCTG GTCCGCGGGT
CGGTTCTCCG AACTAGGGTT GCCGCTGCAG TTCGACGTGG TGGCCGTGGC GCTCTATCTC
GGACTGGTTC CCACGGCACT GGCGTACGCC GCTTACTTCC ACGGGCTCGG TGGGGCCAGG
CCGGTGGTGG CGGCGTTGTC CGCGTTGTTG GAACCGCTCA CGGCCGCGGT GCTCGCGACG
GTGCTCCTCG GGGAGAACCT CGGCGTCGTC GGATGGTGTG GTGCCGTGTT GCTCAGCACC
GCCGTGGCCG GTGGTTACCT CCGTCCGGAC CGCTGA
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| Protein sequence | MQSIGTFRPR AASLSLITAG VLWGTGGLAG AVLSERAGLS STTVAVYRLL LGGVFALLFL
GGTGRLRALP RTAEAVRRLL AAGTLLAVFQ ACYFGAVALT SVGVATMVTI GSVPVFVALA
STVLDRRAPG LSTAVSVGCA VSGLVLLSWP SGDAGVAGAA SGVGGLLGGL ACALASGASF
ATLTLVTRSP VEGLDSLRTT AFGCLVGGVL LAPVAAWSAG RFSELGLPLQ FDVVAVALYL
GLVPTALAYA AYFHGLGGAR PVVAALSALL EPLTAAVLAT VLLGENLGVV GWCGAVLLST
AVAGGYLRPD R
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