Gene Svir_27890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_27890 
Symbol 
ID8388113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3019763 
End bp3020329 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content68% 
IMG OID644976820 
Productacetyltransferase 
Protein accessionYP_003134597 
Protein GI257056765 
COG category[R] General function prediction only 
COG ID[COG0456] Acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0567326 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCA CCTCGCCCGG CCACAAACGC GTCGTCCGGC TCACCGGTGA GGAGTTCCGT 
GCGCTACTGC CCGACGCCCT GGCCATCTAC GTGGCGGCCA TGAACTATCC CCCCGGCACA
GCGCAACAAC GAGCCCCCAT GTGGCTCACC CACATCCTCC GTGCGGGCTG GCGCAGTGTG
GCCGCATTCG ACTCGGACGA CACCCTGGTG GGCCTGGCCT ACGGCTACCG GGGCAGTCCC
GGCCAATGGT GGTACGAACA GGTGCGTCGC GGGGTACTGC ACCACAAGGA CGAGGCCACC
GCCGACGCTT GGCTGTCCGA CTACTTCGAG TTGACCGAGA TCCACGTGCG CCCCGATCAC
CACGGCCGAG GGCTCGGGGA GACCCTGCTG CGCACGTTGT TGGACGGTGT GGAGCAACGG
CACGTGCTGC TTTCCACCCC GGAAGGACCC ACTCGGGCCT GGCGCCTGTA CCGCAGGTTG
GGCTTCGTCG ACGTGCTCCG CCACTACCAC TTCGCGGGTG ATCCGCGGGC TTTCGCCGTG
CTGGGCCGCA CGTTGCCGCT GCCGTGA
 
Protein sequence
MTSTSPGHKR VVRLTGEEFR ALLPDALAIY VAAMNYPPGT AQQRAPMWLT HILRAGWRSV 
AAFDSDDTLV GLAYGYRGSP GQWWYEQVRR GVLHHKDEAT ADAWLSDYFE LTEIHVRPDH
HGRGLGETLL RTLLDGVEQR HVLLSTPEGP TRAWRLYRRL GFVDVLRHYH FAGDPRAFAV
LGRTLPLP