Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_27890 |
Symbol | |
ID | 8388113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 3019763 |
End bp | 3020329 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644976820 |
Product | acetyltransferase |
Protein accession | YP_003134597 |
Protein GI | 257056765 |
COG category | [R] General function prediction only |
COG ID | [COG0456] Acetyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0567326 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGCA CCTCGCCCGG CCACAAACGC GTCGTCCGGC TCACCGGTGA GGAGTTCCGT GCGCTACTGC CCGACGCCCT GGCCATCTAC GTGGCGGCCA TGAACTATCC CCCCGGCACA GCGCAACAAC GAGCCCCCAT GTGGCTCACC CACATCCTCC GTGCGGGCTG GCGCAGTGTG GCCGCATTCG ACTCGGACGA CACCCTGGTG GGCCTGGCCT ACGGCTACCG GGGCAGTCCC GGCCAATGGT GGTACGAACA GGTGCGTCGC GGGGTACTGC ACCACAAGGA CGAGGCCACC GCCGACGCTT GGCTGTCCGA CTACTTCGAG TTGACCGAGA TCCACGTGCG CCCCGATCAC CACGGCCGAG GGCTCGGGGA GACCCTGCTG CGCACGTTGT TGGACGGTGT GGAGCAACGG CACGTGCTGC TTTCCACCCC GGAAGGACCC ACTCGGGCCT GGCGCCTGTA CCGCAGGTTG GGCTTCGTCG ACGTGCTCCG CCACTACCAC TTCGCGGGTG ATCCGCGGGC TTTCGCCGTG CTGGGCCGCA CGTTGCCGCT GCCGTGA
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Protein sequence | MTSTSPGHKR VVRLTGEEFR ALLPDALAIY VAAMNYPPGT AQQRAPMWLT HILRAGWRSV AAFDSDDTLV GLAYGYRGSP GQWWYEQVRR GVLHHKDEAT ADAWLSDYFE LTEIHVRPDH HGRGLGETLL RTLLDGVEQR HVLLSTPEGP TRAWRLYRRL GFVDVLRHYH FAGDPRAFAV LGRTLPLP
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