| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_27640 |
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| Symbol | |
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| ID | 8388088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2990040 |
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| End bp | 2990873 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644976795 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_003134572 |
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| Protein GI | 257056740 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGGCA TCGAGTTCCT CAAGGGGCAC GGCACACAGA ACGACTTCGT GCTACTTCCC
GATCCCGACG CGTCGCTGGA ACTGACCCCC CAACGGGTTG CGGCGCTGTG TGATCGGCGG
CGGGGGCTCG GTGCCGACGG GGTGCTGCGA GTCGTGCGCT CGGCCGCGTT GGACGCCGGT
CCGAGCGACT CGGAGGCCGA GTGGTTCATG GACTACCGCA ACGCCGACGG CTCGATCGCG
GAGATGTGCG GCAACGGTGT GCGAGTGTTC GCACGCTACC TCGTCGAAGC CGGTCTGGAG
GCCGGCCCGG AGTTCCCGGT GGGGACGAGG GCGGGTGACC GTCACGTCCG CGTGCACGAC
GACCTCTCCG TGACCGTGCA TATGGGGGCG GCCACGATCA CCGGCACCTC CGTGGCGGTT
GTGGGTGGGC GCGAACTGTC CGGTGTGGCC GTGGACGTCG GTAACCCGCA TCTGGTGTCG
GTGCTCGACG ACGACGTCGA CGAGCTCGAC CTTCGGGACG CGCCGAGGTA CGACACCGAG
GTGTTCCCCG AAGGGGTCAA CCTGGAGTTC GTCAACGTGC TCGGTTCCGA GGAGCTGCGT
ATGAGGGTCT ACGAACGCGG TGTCGGCGAG ACTCGGGCGT GCGGTACCGG CACGGTGGCG
GCGGTGGCCG CGGCGTTGCA CCTGCGCGGT GTCGACACCG GGGAGTCCAC CGTCGACATT
CCGGGGGGCC GGGTGTCGGT CACGGTGGGC AAGGGCGTTT CGACGTTGAC CGGCCCGGCG
GAGTTCGTCG CCAAGGGCGA ACTCGACCGT GCGTGGTGGG AGGCCCTCGG CTGA
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| Protein sequence | MAGIEFLKGH GTQNDFVLLP DPDASLELTP QRVAALCDRR RGLGADGVLR VVRSAALDAG
PSDSEAEWFM DYRNADGSIA EMCGNGVRVF ARYLVEAGLE AGPEFPVGTR AGDRHVRVHD
DLSVTVHMGA ATITGTSVAV VGGRELSGVA VDVGNPHLVS VLDDDVDELD LRDAPRYDTE
VFPEGVNLEF VNVLGSEELR MRVYERGVGE TRACGTGTVA AVAAALHLRG VDTGESTVDI
PGGRVSVTVG KGVSTLTGPA EFVAKGELDR AWWEALG
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