Gene Svir_27530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_27530 
Symbol 
ID8388077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2974361 
End bp2975482 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content69% 
IMG OID644976784 
Producthypothetical protein 
Protein accessionYP_003134561 
Protein GI257056729 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.589987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCCA CGACAGGACC GAATTCGACG GACGACACGG CGGACACGAC CACGATCGAT 
CTCAGGGATC CGGGGGACTT GCTTGCGGCC ACCCCTCATC TACTCGGCTT CGAACCGAGC
GATTCGGTGG TGCTGGTCGG TCACCGAGGC GAGGCCGGAA CGCACATCGG CAACATCGTG
CGGGCAGATC TACCCACGCC CGGAAACGAG ATCACACTGG CCACACGGCT GGTGGAACCC
CTCCTGCGCA CTTCGGTCGC CGTCACCGTC ATCGTCGTGG GTGGACGGTG TCCGGATGGG
ACGGGCCCAC CCGCCGACGC TGTCGTCACC GCCGTCAAGG ACGTCTTCGG CAAGGCGGGG
CTTCCTGTAC AACACGCCCT GTGGGTGCCG ACGATCCGGG CGGGGGCCCC ATGGCGGTGT
TATGACGACG TCTGTTGTGC GGGGTATCTG CCCGATCCGC GGAGTACGGT GCTGGCGGCC
GTGACCACAC ATGCGGGGTT GGTGACCCAC AGCAGCCGGG CCGCCATGCA ACGTCAGCTC
GATCCCGTGG CACAGGATGT CCTGGACCGC AGGGCGGCGA TGCTGAACCG GCGTGCCGTC
GTCGACGCTC TCGACGAACC GGAGGCGATA CGCCGAGGAC GGGTCGCGGT GCGCAGAGCA
TTGTCGCGGG CGTGGAAGGG GACACTGGCA CCGTCCGACA CCGAGGTGGT GGAGCTGGCG
CTCGGCCTCA CGCTGCCCGA TGTGCGCGAC GCGTGTCTTG CCACGGCCCT ACCCGTCGGC
AGTGCCCACG CCGTCGCAGC GGAGCGGCTG TGGCTTCTGC TGACGCGGCA CACGCCTGCG
CCCGAGCGTG CGGAACCAGC GACCCTGCTG GCCTACTCGG CCTACGTGCG AGGTGAGGGT
GCTCTCGCGG GAATGGCGTT GTCGGTGGCG CGGGCCGCCG ATCCCGGCCA TGTGTTGTCC
CAGTTGCTCA GCCAGGCGCT CGATCACGGT TTACCACCGG AGACGCTCGC CGGTCTGGCC
CGGTCCAGCG ACAACGGTCC GATCTGGAAG GCCCCACCGG ACGACGCCGT CCTCGGCTTT
CGGTGTCACG AAGCCGAGGA CGGCGACTCG GACGGCCCGT GA
 
Protein sequence
MASTTGPNST DDTADTTTID LRDPGDLLAA TPHLLGFEPS DSVVLVGHRG EAGTHIGNIV 
RADLPTPGNE ITLATRLVEP LLRTSVAVTV IVVGGRCPDG TGPPADAVVT AVKDVFGKAG
LPVQHALWVP TIRAGAPWRC YDDVCCAGYL PDPRSTVLAA VTTHAGLVTH SSRAAMQRQL
DPVAQDVLDR RAAMLNRRAV VDALDEPEAI RRGRVAVRRA LSRAWKGTLA PSDTEVVELA
LGLTLPDVRD ACLATALPVG SAHAVAAERL WLLLTRHTPA PERAEPATLL AYSAYVRGEG
ALAGMALSVA RAADPGHVLS QLLSQALDHG LPPETLAGLA RSSDNGPIWK APPDDAVLGF
RCHEAEDGDS DGP