Gene Svir_27290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_27290 
Symbol 
ID8388053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2944661 
End bp2945017 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content70% 
IMG OID644976760 
Producthypothetical protein 
Protein accessionYP_003134537 
Protein GI257056705 
COG category[S] Function unknown 
COG ID[COG1872] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.202729 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.503091 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGCTCG ACCCTGACAC CGGCACGAGG GAACGGGAAG ATCCGATGAG TGAGTTGCGG 
TTCGCGATCA GGGTGAAGCC GGGTGCCAAA CGGGACGCCG TCGGCGGCAT TTGGGACGGA
GCGCTCGGTG AGGCGCTCGT GGTCTCGGTG CGCGCGCCCG CCGTCGACGG CAAGGCGAAC
GAGGCGGTGT GCCGCGTGCT GGCCGAGGCG TTGTCGGTCC GCGCCCGCGA TCTCACCGTG
GTGAAAGGCC ACCGGGCCAG GGACAAGCTC GTCGAATTGC GCGATCCGCC ACCGGGTTGT
GCCGAACGTC TCGCCGAGCT CAGAGGGTCC GGTGGGGAGC CGCGAGGGGT GCGCTGA
 
Protein sequence
MVLDPDTGTR EREDPMSELR FAIRVKPGAK RDAVGGIWDG ALGEALVVSV RAPAVDGKAN 
EAVCRVLAEA LSVRARDLTV VKGHRARDKL VELRDPPPGC AERLAELRGS GGEPRGVR