| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_27100 |
|---|
| Symbol | |
|---|
| ID | 8388034 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 2927000 |
|---|
| End bp | 2927257 |
|---|
| Gene Length | 258 bp |
|---|
| Protein Length | 85 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644976743 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_003134520 |
|---|
| Protein GI | 257056688 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2188] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.631262 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGTC CCGAACGTAG GAAATACAAC CCGGACAACA AAACCGGATA CGAGTACGTA
CTACTGGCCG ATCACCTCGC CGGTCTCATC GAGCAGGGAA AGTGGCCGGC GGGAAGTCGC
ATCCCCGGCG AGCGGGCCCT GTCGGAGGAA TACGGCGTCG CCCTCGACAC CGTCCGCAAG
GCCACGAAGA TCCTGCGTGA GCGTGGTCTG GTGCAGACCC TGAAGTCCAA GGGCACGTTC
GTCACGCCGC GCGACTGA
|
|---|
| Protein sequence | MNGPERRKYN PDNKTGYEYV LLADHLAGLI EQGKWPAGSR IPGERALSEE YGVALDTVRK
ATKILRERGL VQTLKSKGTF VTPRD
|
|---|
| |