Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_27090 |
Symbol | |
ID | 8388033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 2926112 |
End bp | 2926918 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644976742 |
Product | transcriptional regulator |
Protein accession | YP_003134519 |
Protein GI | 257056687 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCAGGGC GACACGGACA GGGCCCCCGC GACAACGCGG ATACCGCAAC CAAAGGAGAG GAACGCAACT ACACCGTTCG CGCGGTTGAA CGAGTCTGTT CAATCCTCAA CCTGCTACAG GAATCCGTCG AAGGCGTCTC CCTCATCGAC GTCGCCCAAG AGACCGAACT GCCGAAGTCG TCGGCTTTCC GGTACCTGTG GACCCTGGAG GCGCATCGCT ACGTCGAGCG AGACGCCGGA ACAGGGCTCT ATCGCCTCGG CCTGGGGTTC GTGGGCATGC AGTCACGCCA TTTGGAAGTG CTGCGAGAAC GCGCTCGGCC CTGGCTGGAG AAAATTCGTG ACGAATTCGG CGAAACGGTC AATCTGGCCA TCCTGGACGG AGACCACATC GTCTATCTCG ACGTGGTGGA GAGCAAACAC CGGGTGCGTT TCGCCTCGGC ACGGGGCTTT CGCGAACCGC TGTATGCCAC CGCGATGGGA CACGCGATCG CGTCCCGGCT GCCCGAGGAG CGCATCCGGG AGCTGCTCCC CCTGTCGGCG ACCGGATACG AGATCGCACC CGACTCCTAT CTCACCGGCA TCGGTGACAT CCAACGACTG GGCTATGCGA TCAGTGACGA CGGTGACGGC CGTTGTGTCG CCGCCCCACT GACGGGCACC CGCCTACCGG TGGCACTCGG GATAAGCGCC CCCGCGGCAC GGTTCTCGCG GGCCGACGCC GACAAGGCCG CCATAAGGCT TCTCGAGGTC ACCAAGGAGA TCACCGTCAA CCCGATCCCC GAACAGCGGA GCTCTCCACA GTCTTAG
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Protein sequence | MPGRHGQGPR DNADTATKGE ERNYTVRAVE RVCSILNLLQ ESVEGVSLID VAQETELPKS SAFRYLWTLE AHRYVERDAG TGLYRLGLGF VGMQSRHLEV LRERARPWLE KIRDEFGETV NLAILDGDHI VYLDVVESKH RVRFASARGF REPLYATAMG HAIASRLPEE RIRELLPLSA TGYEIAPDSY LTGIGDIQRL GYAISDDGDG RCVAAPLTGT RLPVALGISA PAARFSRADA DKAAIRLLEV TKEITVNPIP EQRSSPQS
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