Gene Svir_27090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_27090 
Symbol 
ID8388033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2926112 
End bp2926918 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content64% 
IMG OID644976742 
Producttranscriptional regulator 
Protein accessionYP_003134519 
Protein GI257056687 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCAGGGC GACACGGACA GGGCCCCCGC GACAACGCGG ATACCGCAAC CAAAGGAGAG 
GAACGCAACT ACACCGTTCG CGCGGTTGAA CGAGTCTGTT CAATCCTCAA CCTGCTACAG
GAATCCGTCG AAGGCGTCTC CCTCATCGAC GTCGCCCAAG AGACCGAACT GCCGAAGTCG
TCGGCTTTCC GGTACCTGTG GACCCTGGAG GCGCATCGCT ACGTCGAGCG AGACGCCGGA
ACAGGGCTCT ATCGCCTCGG CCTGGGGTTC GTGGGCATGC AGTCACGCCA TTTGGAAGTG
CTGCGAGAAC GCGCTCGGCC CTGGCTGGAG AAAATTCGTG ACGAATTCGG CGAAACGGTC
AATCTGGCCA TCCTGGACGG AGACCACATC GTCTATCTCG ACGTGGTGGA GAGCAAACAC
CGGGTGCGTT TCGCCTCGGC ACGGGGCTTT CGCGAACCGC TGTATGCCAC CGCGATGGGA
CACGCGATCG CGTCCCGGCT GCCCGAGGAG CGCATCCGGG AGCTGCTCCC CCTGTCGGCG
ACCGGATACG AGATCGCACC CGACTCCTAT CTCACCGGCA TCGGTGACAT CCAACGACTG
GGCTATGCGA TCAGTGACGA CGGTGACGGC CGTTGTGTCG CCGCCCCACT GACGGGCACC
CGCCTACCGG TGGCACTCGG GATAAGCGCC CCCGCGGCAC GGTTCTCGCG GGCCGACGCC
GACAAGGCCG CCATAAGGCT TCTCGAGGTC ACCAAGGAGA TCACCGTCAA CCCGATCCCC
GAACAGCGGA GCTCTCCACA GTCTTAG
 
Protein sequence
MPGRHGQGPR DNADTATKGE ERNYTVRAVE RVCSILNLLQ ESVEGVSLID VAQETELPKS 
SAFRYLWTLE AHRYVERDAG TGLYRLGLGF VGMQSRHLEV LRERARPWLE KIRDEFGETV
NLAILDGDHI VYLDVVESKH RVRFASARGF REPLYATAMG HAIASRLPEE RIRELLPLSA
TGYEIAPDSY LTGIGDIQRL GYAISDDGDG RCVAAPLTGT RLPVALGISA PAARFSRADA
DKAAIRLLEV TKEITVNPIP EQRSSPQS