Gene Svir_26890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_26890 
Symbol 
ID8388013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2895094 
End bp2896023 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content67% 
IMG OID644976723 
Producthypothetical protein 
Protein accessionYP_003134500 
Protein GI257056668 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.66835 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGC AAACGACGAC ACGCCCCGAG GTCACCGAGT TGCCCGACTA CCGCGCCCTG 
TTCGTCGCGG ACATGCGTGG GTTCGGCAGT GTCCCCGGAC GCGACCACGC ACAGGTGACC
CAAGCGATCC CCGGACTGCT ACGGAACGCA TTCCAGCACT GCGGCCTCGG CTGGCTGTGG
GAGAAGGCTC TTTTCCAAGA CACCACGGGA GACGGCTACT TCCTCTGCTT TGACAGCCGG
TACGTCCCGT TCCTGTTGAA CCCGCTGCTT TCCGCGCTTC AGGACACACT CGAATTCCAG
AATTCCCTGC TGCCCCATCC GATCCGGATG CGGGTGAGCG TCAACGTCGG TCCGTTGGCC
GACACCGACG CCGAGTCGAT CAGTCGCGGC AGTGGTACCA CCCGCGTGGA GACACATCGC
CTGCTGGACT CCTCCGCAGT GCGTTCGGTG CTGGACGACT CCGGTCCGGA GACCTGTGTG
GCGGCGATCG TTCCGGAGCG GGTGGTCGAT GACGTCGTCG CCGCCGGGTA CAGCGCCGAA
GGCACGAGCC TCTACCACCG CGTGGAGGCG CGGGAGAAGG AATACCACGG CGTGGCGTAC
CTTCGGGTGC CCAAACCGTC CGGCGGCCTG CTCGCCCACG GGTTCACACC CCGCCACGAC
ACCGAGCCGG ACACCGAAGC CGACCGAGCG ACACCGGAGG CAGGTCACAG CACCGGGGGA
ACCACGGCCA CACACGTCGA CGGTCCGGTG GCCCAGCACG GGAGTCGGGT CACCACCGGC
GTCGATGTCT CGGGCAGCGG CAACACCATC ACCACCGTGC ACGGTGATCA GCACCGGGGG
CCGCGCTACG AAGGCGACGG ACAGATCCAC GTCGGCGGGA ACAACGCGGG CGTCATCAAG
CAGACCATGA AGGGCAGGCG CGCCCGATGA
 
Protein sequence
MTEQTTTRPE VTELPDYRAL FVADMRGFGS VPGRDHAQVT QAIPGLLRNA FQHCGLGWLW 
EKALFQDTTG DGYFLCFDSR YVPFLLNPLL SALQDTLEFQ NSLLPHPIRM RVSVNVGPLA
DTDAESISRG SGTTRVETHR LLDSSAVRSV LDDSGPETCV AAIVPERVVD DVVAAGYSAE
GTSLYHRVEA REKEYHGVAY LRVPKPSGGL LAHGFTPRHD TEPDTEADRA TPEAGHSTGG
TTATHVDGPV AQHGSRVTTG VDVSGSGNTI TTVHGDQHRG PRYEGDGQIH VGGNNAGVIK
QTMKGRRAR