Gene Svir_26780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_26780 
Symbol 
ID8388002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2885209 
End bp2885817 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content68% 
IMG OID644976712 
Producthypothetical protein 
Protein accessionYP_003134489 
Protein GI257056657 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.330222 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.576099 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGTTC GAACGGATGC CACGCCCACC ACCGAGACGT TGTGGGCGAA GGTGCTGAGT 
GAGGTATTCG CCCCCTGGGT GATCGTGATC GTGTTGTCGG GCACGGTCGC GTGGGAGGCG
ACGCATGCGC TGCCCGCCGC GGCCGCGTGG GGTCTGCTGG TCGCTTTGAC CAGCAGTGTC
ATCCCCATGG GGGTGATCGT GTGGGGCGCT CGGCGGGGAC GTTGGGACGG GCACCACGTA
CGGAACCGCG AGGGCAGGTT GGTGCCGCTG TCGACACTGA TCGCATTGAG CGGACTCGGG
CTCGCGTTGC TTCTGGTGTT GGACGCCCCG TGGCTGGTGG TGGCGCTGGA CATCGCCATG
TTGGTGTGCC TGGTGGTGAC GAGCGCGATC ACGATCTGGT GGAAGGTGTC GATGCACGCC
GCCGTCGCCG CCGGCGCGGT CGCGATCCTG GCGGTGACGT ACACGCCGTG GCTGTGGTCG
TTGCTGCTCG TGGCGGGGGC GGTGGGATGG TCCCGAGTGC GCTTGCAGGA CCACACCACC
GCGCAGGTGG TGGTGGGATC GGTGCTCGGA CTCGTCGGTG GTGGCGGGGT CTTCGCGTTC
GTGTGGTGA
 
Protein sequence
MSVRTDATPT TETLWAKVLS EVFAPWVIVI VLSGTVAWEA THALPAAAAW GLLVALTSSV 
IPMGVIVWGA RRGRWDGHHV RNREGRLVPL STLIALSGLG LALLLVLDAP WLVVALDIAM
LVCLVVTSAI TIWWKVSMHA AVAAGAVAIL AVTYTPWLWS LLLVAGAVGW SRVRLQDHTT
AQVVVGSVLG LVGGGGVFAF VW