Gene Svir_26700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_26700 
Symbol 
ID8387994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2876540 
End bp2877040 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content66% 
IMG OID644976704 
Producttranscriptional regulator 
Protein accessionYP_003134481 
Protein GI257056649 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.347504 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.248869 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGCGG ATCGTCCCAC CACCGGAACA CCGTCTCCGA AGCCGGAGCC TCCTCTGACG 
CTGTATCTGG TCAAGCGACT CGAACTCGTC GTGCGCGCGT TGCTGGACGA CGCTCTGCGC
CCGCTCGGAT TGACCACACT GCAGTACACG GCGCTGAGCG TGCTGCAGCG ACGTGGTGGA
CTGTCCTCGG CTCAACTGGC GCGCCGATCG TTCCTCCGCC CGCAGACCAT GCACGAGATG
GTGTTGACCC TCGAACAGCG CGGGTTGATC AGCCGGGAAC GCGATCCCCG CAACCGGCGC
GTCCTCCTCG CCAATCTCAC CGACGAGGGC AAGGCGCTTC TCGCGCGGTG TGAGCCCTTG
GTGCTCGAAT TGGAGGAACG ATTGCTGTCC CAGCTCGATC CGGGTGAGCG GCACCTGTTC
CGGGACAGCC TGGAACGCGG TATCTCGGCG CTCGGAGCAC TGGCACACGG CACGAAATCG
CGTGGTGAGG CGACCGGCTG A
 
Protein sequence
MTADRPTTGT PSPKPEPPLT LYLVKRLELV VRALLDDALR PLGLTTLQYT ALSVLQRRGG 
LSSAQLARRS FLRPQTMHEM VLTLEQRGLI SRERDPRNRR VLLANLTDEG KALLARCEPL
VLELEERLLS QLDPGERHLF RDSLERGISA LGALAHGTKS RGEATG