Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_26080 |
Symbol | |
ID | 8387932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 2811358 |
End bp | 2812491 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644976646 |
Product | vanillate demethylase subunit A |
Protein accession | YP_003134423 |
Protein GI | 257056591 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.819244 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCTGA CTACCCCTCC GCAGGCGGAG GCAACCGCAC CGACCACCGC TGCTGCGAAG ATCTTCAACT ACCCCCGCAA CGCCTGGTAC GTCGCGGCCT GGGACTACGA GGTCACCGAC AAGAAGCCGT TGGCCCGGAC CGTCGCCGGA GTGCCCCTGG CGTTGTGGCG TAACACCGAG GGTCGAGCCG TCGCGCTCGC GGACGCCTGC TGGCACCGGC TCGCACCCCT GTCGAAGGGC AAGATCATCG GCGATGAGCT GCAGTGCCCC TACCACGGCC TGCGCTTCAA CTCCGCCGGT CGCTGCACCG CCATGCCCGC GCAGGAGACC CTCAACCCGA GCGCGCTCGT GCCCTCCTAC CCCGTCGTCG AGCGTTACCG GTACGTCTGG GTGTGGGTGG GCGACCCGAA CCTGGCCGAC CCCAACACCG TGCCCGACAT GCACCAGATG GACGACCCGG CGTGGGCCGG TGACGGCGAG ACCATCCACG CCGACTGCAA CTACCAGCTG GTGCTCGACA ACCTGATGGA CCTCACCCAC GAGGAGTTCG TGCACTCCTC GAGCATCGGC CAGGAGGAGC TTTCCGAGGC CGACTTCGAC GTGGTCCACG AGGGCAACAC CGTCACCGTC ACCCGGTGGA TGCTCAACGT CGACGCACCG CCTTTCTGGC TGAGGAACAT GCGCGACAAG TTCCCGGGCT TCGAGGGCAA GGTCGACCGC TGGCAGATCA TCAAGTTCGA GGCGCCGAGC ACGATCCGCA TCGACGTGGG GGTCGCCAAG GCCGGCACCG GCGCGCCCGA GGGTGACCGC AGCCAGGGCG TCAACGGTTA CGTGATGAAC ACGATCACTC CGGAGACCGA CCGCAGCTGT CACTACTTCT GGGCGTTCAT GCGCAACTAC CGTTTGGACA GCCAGACCAT CACCACCCGG CTGCGCCAGA GCGTGAGCGG TGTCTTCGCC GAGGACGAGG ACATGCTGCG AGCCCAGCAG CGTGCGATCG ACGCCAACCC CGACCACCAG TTCTACAGCC TCAACATCGA CATCGGCGGG ATGTGGGTGC GTCGGATCCT GGAGCGGATG CTGGAAGCCG AGGGGCGGCC GTCGGCGGTC CCCACGGTGG GGCGTGATGC CTGA
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Protein sequence | MTLTTPPQAE ATAPTTAAAK IFNYPRNAWY VAAWDYEVTD KKPLARTVAG VPLALWRNTE GRAVALADAC WHRLAPLSKG KIIGDELQCP YHGLRFNSAG RCTAMPAQET LNPSALVPSY PVVERYRYVW VWVGDPNLAD PNTVPDMHQM DDPAWAGDGE TIHADCNYQL VLDNLMDLTH EEFVHSSSIG QEELSEADFD VVHEGNTVTV TRWMLNVDAP PFWLRNMRDK FPGFEGKVDR WQIIKFEAPS TIRIDVGVAK AGTGAPEGDR SQGVNGYVMN TITPETDRSC HYFWAFMRNY RLDSQTITTR LRQSVSGVFA EDEDMLRAQQ RAIDANPDHQ FYSLNIDIGG MWVRRILERM LEAEGRPSAV PTVGRDA
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